| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3812 |
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| Symbol | |
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| ID | 5318366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 264933 |
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| End bp | 266204 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775624 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312557 |
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| Protein GI | 150375961 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.353807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGA AGCCTTTTAT CAGGACGCTG ATTTCCTGTG CCGCTATCGT CGGTGCAATC
GATGTTGCTG CCGCCACCGA ATTGTCGATG GCGGCCAATT CGACCGGTAA GAATCTGAGC
TTTCTGCGCG AGCAGATCGC CAGGTTCGAG AAGGAGACGG GCCATAAGGT CAATCTGGTG
ACGATGCCGG CGTCGAGCAG CGAGCAGTTC AGCCAATACC GGCTCTGGCT CGCGGCCGGC
AACAAGGACG TCGACGTCTA CCAGACGGAT GTCATCTGGG CTCCACAGCT CGCCGAGCAG
TTCGTAGACC TGACCGAGGC CACGAAGGAC GTCGTCGCCG ACCATTTCCC CTCGATCATT
CAGTCACAGA CCGTCAACGG CAAGTTGGTG GCCTTGCCCT TCTATACCGA TGCGCCGGCG
CTCTATTACC GCAAGGACCT GCTCGACAAA TACGGCAAGG CGCCGCCGAA GACCTGGGAT
GAAATGGCAG CGACGGCCAA GGAAATTCAG GAAAAGGAGC GTGCTGCCGG CAATGCCGAT
ATCTGGGGCT TCGTTTTCCA GGGCAATGCC TATGAAGGGC TCACCTGCAA CGCACTCGAG
TGGATCAAGT CCTCGGGCGG TGGCCAGATC GTCGAGCCCG ATGGCACGAT CTCCGTCAAT
AATGAGAAGG CGGCCGCGGC CGTGGAACGT GTCAAGGAAT GGATCGGCAC GATCGCGCCC
AAGGGCGTGC TTGCCTATCA GGAAGAGGAA TCGCGCGGGG TCTGGCAGAC CGGCAATGCG
GTCTTCATGC GTAACTGGCC CTATGCCTAT GCGCTCGGTA ACGGCGACGA CAGTGCCGTC
AAGGGCAAAT TCGAAGTGGC CCCGTTGCCG GCCGCCGCCG ATGGCGAGAA GCCATCTTCC
ACCCTCGGTG GATGGAATCT CGCGGTCTCG AAATATTCCG ACGAGCAGGA GGCGGCGATT
GCGTTTGTCA AATTCCTCGG GTCAGCCGAG ACGCAGAAGG TGCGCGCGAT CGAGCTCTCG
AACCTGCCGA CGATCGCTGC ACTTTACGAT GATCCGGAAA TCGCGGCCGC TCAGCCGTTC
ATGCCGCACT GGAAGCCTAT CTTCGAGAGC GCCGTGCCGC GCCCCTCGGC AGTGGCCAAG
GTGAAGTATA ACGAGGTTTC GTCCAAGTTC TGGAGCGCCG TGCACAACAC GCTTTCGGGC
AACGGAACGG CCGCGGAGAA CCTGGAACTT CTCGAAGTCG AACTGACCGA ACTCAAGGGT
GACTCCTGGT AA
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| Protein sequence | MDVKPFIRTL ISCAAIVGAI DVAAATELSM AANSTGKNLS FLREQIARFE KETGHKVNLV
TMPASSSEQF SQYRLWLAAG NKDVDVYQTD VIWAPQLAEQ FVDLTEATKD VVADHFPSII
QSQTVNGKLV ALPFYTDAPA LYYRKDLLDK YGKAPPKTWD EMAATAKEIQ EKERAAGNAD
IWGFVFQGNA YEGLTCNALE WIKSSGGGQI VEPDGTISVN NEKAAAAVER VKEWIGTIAP
KGVLAYQEEE SRGVWQTGNA VFMRNWPYAY ALGNGDDSAV KGKFEVAPLP AAADGEKPSS
TLGGWNLAVS KYSDEQEAAI AFVKFLGSAE TQKVRAIELS NLPTIAALYD DPEIAAAQPF
MPHWKPIFES AVPRPSAVAK VKYNEVSSKF WSAVHNTLSG NGTAAENLEL LEVELTELKG
DSW
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