| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_02930 |
|---|
| Symbol | |
|---|
| ID | 8631931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 320015 |
|---|
| End bp | 321295 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate-binding protein |
|---|
| Protein accession | YP_003313096 |
|---|
| Protein GI | 269793641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG TCGCTCGTTC AACGAAGGTC GTCGGCGCAG TCGCCACGAC GATGGCACTG
CTGCTGGCAG CAGGCTGTTC AGGAGGAGGA GACGACGCCT CCGCAGACGG CAGCGTCACC
CTCGAGTTCG CGCAGTGGTG GGAGCCGGAG CTCCCCGAGG GCGAGCTCCG TGCCCTCATG
GACACCTTCG AGTCCGAGAA CCCCGGGATC ACCGTCGAGC TCCTCAGCGG CCCCTACGCC
TCCACCAAGG AGCAGGTCGT CGCAGGAGCC GCCACCGGCA CCATGTCCGA CGTCGTCGGC
CTCGACGGCG CATGGGTGAG CGACTTCGCC AAGCAGGGCG CGCTCGCCGA CATGTCCCAG
CTCATGACGG ACGCCAAGTA CGACGACAGC CAGCTGGCCA GCCAGGTGCA GATCGACGGC
TCCACCTACA TGATCCCCGT CGTGAACTTC GTCTACCCGA TGTTCACCAA CGACGACCTC
CTCGCACAGG CCGGCGTCGA CGCACCGCCG TCGACCCGCA CCGAGTTCAC CGACGCCGCA
GAAGCCGTCA CCGCACTCGG CGAGAACACC TACGGCTGGA TCGTCCCGCT GTCCCTCGAG
GCCCCCAACG GCATCCAGAA CGACGTCATG TCGTGGGCCT GGGCCTCCGG CGGCACCATG
CTCAAGGACG GCCAGCCCGA CCTCACCAAC CCCGACGTCA CCTCCGCCGT CGACTACGTC
AAGTCCCTCT GGGACGCCGG CGTCGTCGCA CCGGGCTCCC TCACCATGAA GGAGCAGGAC
AAGGTCGAGG AGTTCACCAA CGGCCGTGTC GGCATGATGA TCGACTCCCT CGCGCACATC
AACCTCATCC GCGAGTCCAA CCCCGACCTC AACTTCTCCG TCTCGGCCGT CCCGGCCGAG
GACGACTTCA CCGGCGAGCG TGGCATCCCC TACGCCTCCT GGGGCATCGG TGTCTCGGAG
AACTCCGAGC ACAAGGAAGA GGCCTGGAAG CTCGTGGACT TCCTCATGAG CGAGAAGACC
AACTCCGACC TCTCGTCCAT GGCCAACGCC TTCCCTGGTA ACACCACCTC CGTGCCCGAC
TTCGTGGAAG ACGACGAGAC CTTCGCGGCC GCCTTCGAGA TCTACAAGTC CGGGTACCCC
GCGAACGAGT TCGTCGGGCT CCCCGTCGCA GAGCAGCTCA TGCGCCTCTT CGACGAGCAG
CTGCAGAAGA CACTCACCGG TGACCAGTCG GTCGACGACA TGCTGCAGGC GTCGCAGGAC
GCCTGGACGG CTGAGTTCTA G
|
|---|
| Protein sequence | MSNVARSTKV VGAVATTMAL LLAAGCSGGG DDASADGSVT LEFAQWWEPE LPEGELRALM
DTFESENPGI TVELLSGPYA STKEQVVAGA ATGTMSDVVG LDGAWVSDFA KQGALADMSQ
LMTDAKYDDS QLASQVQIDG STYMIPVVNF VYPMFTNDDL LAQAGVDAPP STRTEFTDAA
EAVTALGENT YGWIVPLSLE APNGIQNDVM SWAWASGGTM LKDGQPDLTN PDVTSAVDYV
KSLWDAGVVA PGSLTMKEQD KVEEFTNGRV GMMIDSLAHI NLIRESNPDL NFSVSAVPAE
DDFTGERGIP YASWGIGVSE NSEHKEEAWK LVDFLMSEKT NSDLSSMANA FPGNTTSVPD
FVEDDETFAA AFEIYKSGYP ANEFVGLPVA EQLMRLFDEQ LQKTLTGDQS VDDMLQASQD
AWTAEF
|
|---|
| |