Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3595 |
Symbol | |
ID | 8334948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4013179 |
End bp | 4014465 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956738 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003114341 |
Protein GI | 256392777 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.931004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCC AGTCCATAGC CCGGCGTGTC GCAGCGGCCG GTCTGGCTTT GGCGGTCACC GGAGCAGCCG GCGCCTGTTC GGCGTCCAAG AGCTCGACGG GATCGGCCGC CTCCGGTGGC GGAACCTCCG CAGCGGCCGG CGGCGGCGGC GGAACCTTCA CCGTCTGGGA CCCCTACCCG CAGTTCGACA ACGGCTCGGC CTGGTCCCAG CTGCTGACCA AGTGCGGCAG CCAGGCCGGG GTGACGGTCA AGCGCACCGG CTTCGACACC ACCGACCTGA CCACCAAGGT GCTGCTGGCC GCGCAGCAGG GCAACTCCCC GGACGTGCTG ATCGTCGACA ACCCGGTGGT CTCCACGCTC GCCGACGCCG GCGTGATCAC CGACACCGGC ACCACGCATC TGGACACCAC GGCGATCGCC CCGAACCTGC TGGCCGCGGG GCAGCTCGCC GGGAAGACCT ACGGCGTGCC GATCGGCGCC AACACCCTGG CGCTGTACTA CAACAAGGCG GTGCTGTCGG CGGCCGGCGT GGACATCTCG ACCGTGAAGG ACTGGTCCAC CCTGACCGCC GCGCTGGCGA AGGTCACCGC GGCCGGCAAG AAGGGCATCA CGTTCTCGGC GATCGGCACC GAGGAGGGCA GCTTCCAGTT CCTGCCGTGG TTCTGGGGGT CGGGGGCGGA CCTGAAGAAG CTGGACTCCC CGCAGGGGGT CTCGGCGCTG GCGCTGTGGA CGGACTGGCT GAAGAAGGGC TACGCCCCGA ACTCGGTCAT CAACAACACC CAGACGACCA GCTGGCAGGA GTTCGCCACC GGGCAGTACG CCTTCAGCGA GAACGGCACC TGGCAGCTGG CCAACGCCAA GAAGGCCGGG TTCGACTACG GCATCATCCC GATCCCGGCG CTGAACGGCG GAACCGCCGC GGCGCCGACG GGAGGGGAGT TCGTCACCGT CCCGGTCCAG GACAAGACCG ACCGCTACGC GACCTCGCAG AAGCTCGTGA GCTGCCTGAC CAGCGCCGAC AACGCGCAGG CGACCGACAC CACGCTGTCC TACGTCGCGG CCACGCCGCA GGTGCAGGCC AAGCAGGTCG CCGCCGACCC CGCCCTGCAG CCGTGGGTCG CCGCGGTCGC CGCGGCCAAG GGACGCACCA GCGACGACCT GGGGACGAAG TACCCGAAGA TCTCCCAGCC GATGTGGACC GCGGTCCAGG CCGCGCTCAG CGGCTCGGCC TCGCCGCAGT CGGCGCTGAC GACCGCGCAG AACGCCGCCG CCGCGGCGAC CAAGTGA
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Protein sequence | MKAQSIARRV AAAGLALAVT GAAGACSASK SSTGSAASGG GTSAAAGGGG GTFTVWDPYP QFDNGSAWSQ LLTKCGSQAG VTVKRTGFDT TDLTTKVLLA AQQGNSPDVL IVDNPVVSTL ADAGVITDTG TTHLDTTAIA PNLLAAGQLA GKTYGVPIGA NTLALYYNKA VLSAAGVDIS TVKDWSTLTA ALAKVTAAGK KGITFSAIGT EEGSFQFLPW FWGSGADLKK LDSPQGVSAL ALWTDWLKKG YAPNSVINNT QTTSWQEFAT GQYAFSENGT WQLANAKKAG FDYGIIPIPA LNGGTAAAPT GGEFVTVPVQ DKTDRYATSQ KLVSCLTSAD NAQATDTTLS YVAATPQVQA KQVAADPALQ PWVAAVAAAK GRTSDDLGTK YPKISQPMWT AVQAALSGSA SPQSALTTAQ NAAAAATK
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