| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0596 |
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| Symbol | |
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| ID | 5296780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 628161 |
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| End bp | 629333 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640768858 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001305848 |
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| Protein GI | 150020494 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00439649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TATTGGTATC TCTTTTAATG ATTATTATGG TTTTTAGTGT TTTTGCTACA
AAGATTACTA TTTGGACATC AGAGGCACAA GCACCTATTT TAACAAAACT TGCTGATGAA
TTCAAGTCTA TTTACGGTAT TGATGTAGAA GTTGTTCAAG TTAATTTTAA TGATATAAAA
TCCAAGTTTT TAACTGCGGC ACCAGCTGGT GAAGGTGCAG ATATTATAGT TGGTGCACAC
GACTGGGTAG GAGAATTAGC AGCAAATGGT CTTTTAGAAC CAATTCCTGT TCTTCCTGAA
AAAGACAAAT ACTTACCAAC TCCACTTAAA GCATTTACTT ACAACGGAAA GTTATACGGT
ATACCGTATG CATTTGATGG ACCAGCTTTG ATTTACAACA AAGATTATGT TGAAGAACCA
CCAAAGACAT TTGATGAATT AATTGGACTT GCTAAACAAA TTCAAGATGA ATATGAAGGA
GAAGTAAGAG GATTAGTTTA TGACTTTAAA AACTTCTACT TCAGCAGCTA TGCAATTTTT
GGTTTTGGAG GATACGTTTT TGGTGAAAAA GATGGAAAGA TTAATGTAAG AGATATTGGA
CTTGCAAATG AAGGAGCAGT AAAAGGGTTA ACTTTGATTA AAAAATTAGT TGATGAAGGT
CTTCTTGAAT CTGGAGATAA CTATAATGTT ATGGATAATA TGTTCAAAGA TGGTCAAGCT
GCTATGATAA TTAATGGGCC ATGGGCAGTG CCTGGATGGA AAGAAGCAGG TATCGATTTT
GGGGTTGCAC CAATTCCAGA ACTTGAACCA GGCGTAAAAC CAAAACCATT CTTTGGTGCA
CAGGGATTTA TGGTAAATGC AAAATCTCCA AACAAACTTT ATGCAATTGA ATTTTTGACC
AAGTTTATTG CTACAAAGGA TGTAATGTAC AGAATATATC TTGCCGATCC AAGAGTTCCA
TCTAGGAAAG ACTTATTACC AATGGTTGAT GAGGTAACAG CTGCATTTGC AGATTTTCTT
GGAAATTATG GACTTCCAAT GCCAAATGTT CCAGAAATGG CCGGTGTATG GGGGGCAATG
GGCGATGCAC TTTCTAAAGT TCTTGACCAA GGAGTTCCAG TCGAACAAGC TTTAAAAGAA
GCTGTAAATA CAATTTTAGC AGGAATTAAG TAA
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| Protein sequence | MKKLLVSLLM IIMVFSVFAT KITIWTSEAQ APILTKLADE FKSIYGIDVE VVQVNFNDIK
SKFLTAAPAG EGADIIVGAH DWVGELAANG LLEPIPVLPE KDKYLPTPLK AFTYNGKLYG
IPYAFDGPAL IYNKDYVEEP PKTFDELIGL AKQIQDEYEG EVRGLVYDFK NFYFSSYAIF
GFGGYVFGEK DGKINVRDIG LANEGAVKGL TLIKKLVDEG LLESGDNYNV MDNMFKDGQA
AMIINGPWAV PGWKEAGIDF GVAPIPELEP GVKPKPFFGA QGFMVNAKSP NKLYAIEFLT
KFIATKDVMY RIYLADPRVP SRKDLLPMVD EVTAAFADFL GNYGLPMPNV PEMAGVWGAM
GDALSKVLDQ GVPVEQALKE AVNTILAGIK
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