| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0178 |
|---|
| Symbol | |
|---|
| ID | 7862050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 185642 |
|---|
| End bp | 186991 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864255 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002880205 |
|---|
| Protein GI | 229818679 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC TGACGACGAC GGCGTCGCCC GCGTTCCGCA GGCCGGGTGG CGCCGTGTCC
CGCCGCGCGA TGCTCGGGCT GCTCGGTGCA GGGGCCGCGG GCCTGACCGC CGCGTGCTCC
GCGTCCATCG GCGGCGGCAT CGCCCCCGAC CCCGCCGCGT TCTTCTCCGG CGACTACGAC
GGCGATCCGG TGCGCCTCGA CTTCTGGAAC CCGTTCACCG GCGGCGACGG ACCCGCGATG
GGCGCCATCG TCGACGCGTT CAACGCCGCG CACCCGCAGA TCGACGTCCG GATGTCGTCC
ATCAACGCCG ACCAGATGTA CGCCAAGCTG CTCCCCGCCG TCGGTGCCGG GCAGGGCCCG
GACGTGGTCG CCATGCACCT CGACCAGCTC GCGACGTTCG CCATCCGAGG CACGATCGTG
TCGCTCGACG ACATCGTGGA GGGCCTCGAG CTCGACGGCG CCGACTTCGT GGCGCAGGCC
TGGGAGGCCA CGGTCTTCCA GGATCGGCGC TTCGGCATCC CGCTCGACTT CTTCACGGCG
GCGCAGTACT GGAACGTCGA GGCGTTCGAC GCCGCCGGCG TCAGGGCGCC GTGGGACGGC
AGCTCCTACC TGGACGTGAT GGCGGGCCTG CAGGCCTCCG GCGTCGCGAA CCCGTTCTGG
GTGTCGCCCG CCTGGCAGAC GTTCGTGGGA CTCCTCGGCC AGTTCGGGGG CTCGCTGTTC
GACGCGGACG GCACGACGGC GACCATGGGC TCGGACGCCG GCGTCGAGGC GCTGACGTGG
ATATGCGACG TCGTCGCCGA CGGGTTCAGC CCCGCGGGCG TGACCGACGT CCGGCCCCCG
TTCAAGAACG GCTCGTGCGT GACGATGACC GACCTGCCGG CCGCGATCCC GGACCTCACC
CTCACGGCAC CGGACCTCGA GTGGGGCGTC GGTCCGTTCC CGCAGGTCGG GCCGCAGCCG
GGCACGTTCG CCAACTCGCA CACGTTCACG ATCACGCAGC AGACGCAAGC CGACGACGAC
GTCGCCCAGG CCGCGCAGGT GTTCGTCCAC TGGGTGTCCC AGAACTCGGG TCAGTGGGCC
GCCGGCGGTC TCACGCCGGC CAGCACGTCG GTGCGGGAGT CGGCGGAGTT CGCCGCGACG
CCGCAGTCGG TCCTTGCGAC GGAGGAGGTC TTCGCCTCCG CGGTCTTCCT CCCGCAGATC
CCCTCGTCGC GCGACATCGC GGCGAACTCC TACCAGCGGG CCGTCAGCGA GGCGGTGCTG
GGGCAGGCCA CGCCCGCGGA CGCCCTGGCG TTCGCCCAGC GGACCGCGCA GAGCCAGCTC
GACGACGTCC GCCGGCTCTT CGAGTCCTGA
|
|---|
| Protein sequence | MTRLTTTASP AFRRPGGAVS RRAMLGLLGA GAAGLTAACS ASIGGGIAPD PAAFFSGDYD
GDPVRLDFWN PFTGGDGPAM GAIVDAFNAA HPQIDVRMSS INADQMYAKL LPAVGAGQGP
DVVAMHLDQL ATFAIRGTIV SLDDIVEGLE LDGADFVAQA WEATVFQDRR FGIPLDFFTA
AQYWNVEAFD AAGVRAPWDG SSYLDVMAGL QASGVANPFW VSPAWQTFVG LLGQFGGSLF
DADGTTATMG SDAGVEALTW ICDVVADGFS PAGVTDVRPP FKNGSCVTMT DLPAAIPDLT
LTAPDLEWGV GPFPQVGPQP GTFANSHTFT ITQQTQADDD VAQAAQVFVH WVSQNSGQWA
AGGLTPASTS VRESAEFAAT PQSVLATEEV FASAVFLPQI PSSRDIAANS YQRAVSEAVL
GQATPADALA FAQRTAQSQL DDVRRLFES
|
|---|
| |