| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0364 |
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| Symbol | |
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| ID | 1181973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 398111 |
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| End bp | 399427 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391732 |
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| Product | sugar ABC transporter, periplasmic sugar-binding protein, putative |
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| Protein accession | NP_790213 |
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| Protein GI | 28867594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCC ACAAAGCACT TTGCCTGTCC GCAGGTGTGT CTGTTGCCCT CATCAGCCTT
GCCGCTCAGG CCGCCGAAAC CGTGACCATC GCCACTGTGA ACAACGGCGA CATGATCCGC
ATGCAACGCC TGTCGAAGAT CTTCGAACAG CAGCACCCTG ATATCAAACT CAACTGGGTG
GTGCTGGAAG AGAACGTTTT GCGCCAGCGC CTGACCACCG ACATTGCCAC CCAGGGTGGC
CAGTTCGACG TGCTGACCAT CGGCACCTAC GAAACCCCGC TGTGGGGCGC CAAGCAATGG
CTGGAGCCGA TCACCGACCT TGCGCCGGAA TACGACCTGG AAGACATCTT TCCCTCGGTG
CGTCAGGGCC TGTCGGTCAA AAACACCCTC TACGCCCTGC CGTTTTATGG CGAAAGCACG
ATCACCTATT ACCGCACCGA CCTGTTCAAG CAAGCGGGCC TGAGCATGCC GGAGCGCCCG
ACCTGGACGC AGTTGGGCGA GTTCGCGGCA AAGCTTCATC AGCCTGACAA GGGCGTGTAC
GGCATGTGCC TGCGTGGCAA AGCGGGTTGG GGTGAGAACA TCGCGCTGCT CAGCACCATG
GCCAACGCGT TCGGCGCGCG CTGGTTCGAT GAACACTGGA AACCCGAACT GAACAGCCCG
GAATGGGCTA ACGCTGCGAA CTTTTACGTC AACACCCTGA AAAACTATGG CCCGCCGGGC
GTATCGAGCA ACGGTTTCAA CGAAACCCTC GCGCTGTTCA ATAGCGGCAA ATGCGCCTTG
TGGGTGGACG CCAGCGTGGC GGGCTCCTTC ACCACCGACA AGGAACAGAG CAAGGTGGTC
GACAGCGTCG GCTTTGCGCC TGCGCCGGTT GAAGTGACCG ACAAAGGTTC TTCATGGCTT
TACGCCTGGT CGCTGGCGAT ACCGGCCACC TCCAGGCACA AGGATGCGGC CAAGGCATTT
ATTACCTGGG CGACGTCCAA AGCGTATATC CAGTTGGTCG CCGAGAAGGA CGGCATCACC
AATGTGCCGC CTGGTACCCG GACCTCCACC TACAGCGAGG CCTACCTCAA GGCTGCGCCG
TTCGCCAAAG TCACGTTGCA GATGATGCAG CACGCCGACC CTGCACAACC CTCGGCCAAG
CCTGTGCCTT ATGTCGGCAT TCAATACGTG ACCATTCCGG AGTTCCAGGC CATCGGCACC
TCGGTCGGCA AGCTGTTCTC AGCCGCTGTG ACCGGGCAAA CCACCACTGA ACAAGCCCTC
ACTGCCGCAC AGGCCGTCAC CGAACGCGAG ATGAAGCGCG CCGGTTATCC AAAGTAA
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| Protein sequence | MNIHKALCLS AGVSVALISL AAQAAETVTI ATVNNGDMIR MQRLSKIFEQ QHPDIKLNWV
VLEENVLRQR LTTDIATQGG QFDVLTIGTY ETPLWGAKQW LEPITDLAPE YDLEDIFPSV
RQGLSVKNTL YALPFYGEST ITYYRTDLFK QAGLSMPERP TWTQLGEFAA KLHQPDKGVY
GMCLRGKAGW GENIALLSTM ANAFGARWFD EHWKPELNSP EWANAANFYV NTLKNYGPPG
VSSNGFNETL ALFNSGKCAL WVDASVAGSF TTDKEQSKVV DSVGFAPAPV EVTDKGSSWL
YAWSLAIPAT SRHKDAAKAF ITWATSKAYI QLVAEKDGIT NVPPGTRTST YSEAYLKAAP
FAKVTLQMMQ HADPAQPSAK PVPYVGIQYV TIPEFQAIGT SVGKLFSAAV TGQTTTEQAL
TAAQAVTERE MKRAGYPK
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