| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0431 |
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| Symbol | |
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| ID | 4076191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 442988 |
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| End bp | 444295 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005726 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_612426 |
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| Protein GI | 99080272 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGA GAAACGCACT TTGTGCGGCC TCTGCACTTG CGGTTATGGC AACTGGCGCC
GTCCAGGCCG AGACCACATT GACCATCGCG ACCGTGAACA ACGGCGACAT GATCCGGATG
CAGGGCCTCA CTGACGACTT CACCGCCAAA CATCCCGACA TCCAGCTGGA GTGGGTCACG
CTCGAAGAGA ACGTGCTGCG TCAGCGCGTG ACACAAGACA TCGCCACCAA CGGCGGCCAG
TTCGATGTGA TGACCATCGG CATGTACGAA ACCCCGATCT GGGCCGCTCA GAATTGGCTT
GTGCCGCTGA CCGACATGGG GGCTGATTAC GACGCGGACG ACATCCTGCC CGCGATGCGC
GCTGGCCTTT CACACAATGG CACTCTCTAT GCCGCGCCGT TTTACGGTGA AAGCTCCATG
GTCATGTATC GCACCGACCT GATGGAGGCC GCGGGCCTGA CAATGCCCGA AGCCCCCACA
TGGGAGTTCA TCAAGGAAGC CGCCGCCGCG ATGACAGACA AGGACGCCGA AATCTACGGC
GCATGCCTGC GCGGCAAGGC AGGATGGGGC GAGAACATGG CCTTCATCAC CACCGTGGCG
AACAGCTTTG GTGCGCGCTG GTTTGACGAA GACTGGACGC CGCAGCTCGA CAGCCCCGAG
TGGAAAGAGG CGGTCACTTT CTACAACGAT CTGCTGCAAA GCTACGGACC TCCGGGTGCC
TCTACAAATG GGTTCAACGA GAACCTCGCA CTGTTCCAGC AAGGCAAGTG TGGCATGTGG
ATCGACGCGA CTGTGGCGGC CTCCTTCGTG ACCAACCCCG ACGATTCCAC CGTCGCTGAC
AAGGTTGGAT TTGCTCTGGC ACCCGACACC GGCAAGGGCA AACGGGCCAA CTGGCTCTGG
GCCTGGGCGC TGGCCGTGCC TGCGGGTTCT GACGCCAAGG ATGAGGCCAA GGCATTCATC
GAATGGGCCA CCTCCAAGGA GTATCTTGCG CTTGTGGCGG AAAACGAAGG TTGGGCCAAT
GTACCGCCTG GCAGCCGCAC GTCGCTTTAT GAGAACCCTG AATACGCCAA GGTTCCCTTT
GCGCAGATGA CGCTCGACTC GATCAATGCG GCGGACCCCA ACAGCCCCAC CGTGGATCCC
GTGCCCTATG TGGGCATCCA GTATGTCGCG ATCCCCGAAT GGGCCGGCAT CGGCACCAGC
GCAGGCCAGG AATTCTCGGC CATGGTCGCA GGTCAGCAAA CCCCGGACGA AGCGCTTGCA
AAAGCACAGG CTCTGGTCGC TGACGAAATG GAAGCCGCAG GCTACTAA
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| Protein sequence | MYLRNALCAA SALAVMATGA VQAETTLTIA TVNNGDMIRM QGLTDDFTAK HPDIQLEWVT
LEENVLRQRV TQDIATNGGQ FDVMTIGMYE TPIWAAQNWL VPLTDMGADY DADDILPAMR
AGLSHNGTLY AAPFYGESSM VMYRTDLMEA AGLTMPEAPT WEFIKEAAAA MTDKDAEIYG
ACLRGKAGWG ENMAFITTVA NSFGARWFDE DWTPQLDSPE WKEAVTFYND LLQSYGPPGA
STNGFNENLA LFQQGKCGMW IDATVAASFV TNPDDSTVAD KVGFALAPDT GKGKRANWLW
AWALAVPAGS DAKDEAKAFI EWATSKEYLA LVAENEGWAN VPPGSRTSLY ENPEYAKVPF
AQMTLDSINA ADPNSPTVDP VPYVGIQYVA IPEWAGIGTS AGQEFSAMVA GQQTPDEALA
KAQALVADEM EAAGY
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