Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4940 |
Symbol | |
ID | 8007533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 318427 |
End bp | 319881 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644821857 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002973117 |
Protein GI | 241113282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATCG ATATCGGAAA TATGTCGCGA CGTGACCTGC TGAAAAGCGC TTCCGTCGCA GCTCTTGTGG CTGGCGCGGG ATCACTGGCC ATTCCACGGC GAGGAGCCGC GCAGGATGCG AACACGGTTC GCGTCCTGTC CGTTGAAGAC CCATTCTTCT TCTCAATGAA GGAGTTGGTG CCGGAATACG AGAAAGAAAC CGGTATCAAG GTCGAACTGG AGAGTCTCTC CTATGACGCC CTTCAATCGC GCCTCGTGTC TGCCTTTGTC GCCAAGACCT CAGACGCCGA CGTCATCGTT GTCGATCAGA TGTGGCTCGG GCAGTACCTC GACAATGGCT GGATCATCTC GCTGAACGAT TTTATTGCCA AGGACAGCGA ATTCGACCTC TCAGACTTCA TCCCGGAGGT CCTTTACTCC TCGAACATGT GGCGCGGCCA GATCGGGACA TTGCCGGTCG CCGCCTATGC CCAAGGGGTT ATGTACCGCA AGGACGTGTT TGACAAACTC GCCATTGAAG CGCCGCCGAC CAAGACCTCG GAAGACTGGA CCTGGACCAA ATATGTCGAC ACACTGAAGT TGATGGAAGG CAAGTCATTT GGCGGCAAAC CGTTGTTTCC CACGGTTGTC TGCGGCTCCC AACCGTCGCC GATCGTCCAC ATGTTTACGC AGGTGTCGGC AAGCCACGGT GCCAACTGGT TCAAATCATT CCCTGCCGAC CCGTGGGATT TCTCTCCGCA GTTGACAAGC CCCGCCTGGG TCAAATCTGT TGAAGTCTAT AGGCAGCTCT ACAAGCTGTC TCCGCCTGAA GCGATCAACT ATGTCTGGTT CGACGCCGGC ACCCGTTTTG CCAAAGGTGA CATCGGGATG TTCTACTGGT GGACGCCGTA CTTCTACCTG ATCAAAAACT CGGGCTACAT GACCGGCAAG AAGTCGGACG TGATGGACAA GTACGCGACG GCGGCCTTGC CAAAGGCTGA GGGCGTGCCT CAGACGGTCA GTCTCGGCGG ATGGAGCCTT GGCATCCCAT CCAGTTCCGA AAGGCAAGAA GCAGGCTACG CCTTCATCAA ATGGGCGACC TCGAAAACCA CGCAGAAGAA AATGGCTCTT TGGCCGGACC TTAACTACCA ATTCTCCGAC TTTGCGCGCG TTTCACTCTA CGAAGACGAG GAAGTCAAAG CGCTCTACCC GTACCTCGAT GTGCAGTATG CGATGATGAA GCAGGGTAAC GGCAAGGTCA CACGCCCGCC TGTACCTGGT TACACGGCCA TTGAAAGCGT GCTGGGCCTC ACATTGAACC AGCTTTTGAC CGGTAGCGAA GAGCCGAAGA CCGGCCTTGA ACGTGCCAAC AGCCTGTTCG AGAGCATCCT GAAGGGTAAT CTCATGATCC CTTATCAAAA AGCCAGCTAC GCAGACACTC TTGACGGGGC CAAAGCCCAG ATCGCCAAGA GGTAA
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Protein sequence | MTIDIGNMSR RDLLKSASVA ALVAGAGSLA IPRRGAAQDA NTVRVLSVED PFFFSMKELV PEYEKETGIK VELESLSYDA LQSRLVSAFV AKTSDADVIV VDQMWLGQYL DNGWIISLND FIAKDSEFDL SDFIPEVLYS SNMWRGQIGT LPVAAYAQGV MYRKDVFDKL AIEAPPTKTS EDWTWTKYVD TLKLMEGKSF GGKPLFPTVV CGSQPSPIVH MFTQVSASHG ANWFKSFPAD PWDFSPQLTS PAWVKSVEVY RQLYKLSPPE AINYVWFDAG TRFAKGDIGM FYWWTPYFYL IKNSGYMTGK KSDVMDKYAT AALPKAEGVP QTVSLGGWSL GIPSSSERQE AGYAFIKWAT SKTTQKKMAL WPDLNYQFSD FARVSLYEDE EVKALYPYLD VQYAMMKQGN GKVTRPPVPG YTAIESVLGL TLNQLLTGSE EPKTGLERAN SLFESILKGN LMIPYQKASY ADTLDGAKAQ IAKR
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