Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0736 |
Symbol | |
ID | 8131661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 856908 |
End bp | 858173 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644864020 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003016326 |
Protein GI | 253687136 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA AGAATAAAGT ATCTACCCTA TTTGCAGTTT CATTCCTCAC GCTGGGTTTA TCGAGTCATA GCCTGGCAGC TGAAGTCACC GTGTGGGCCT GGGATCCTAA TTTCAATGTT GCGGCAATGC ATGAGGCATC GTCGATATAT AAAAAAGCCG ATCCAAGTTT CAGTCTAAAA GTGATCGATT CAGGTAAAGA AGATATTGAG CAGAAATTAA ATACCATGTT GGCTTCAGGG GTTAAAAACT CCCTTCCTGA TATTGTGCTG ATTGAAGATT ATAATGCTCA GAAATATCTT CAGGCTTATC CTGACTCGTT TATCCCATTA CAGGATGCCA TCGATTATAG CCAGTTTGCG CCTTATAAAA CGAAAGTGAT GACGGTAGGG AACAAGGTAT ACGGTGTCCC TTTTGATTCC GGCGTAGCGG GAATGTTCTA TCGACTCGAT TATCTGGAGG CTGCCGGATA TAAAGAGAGC GATATGGTGA ATATTACCTG GGATAAATAT ATTGAAATCG GTAAACAGGT AAAAGCGAAA ACCGGCGTTG ATATGCTGAC CTATGATATG AACGATGTGG TGCTTCCTCA TATTATGATG CAGTCCGGTG GAGAATGGTT CTTCGATAAT CAGGGGCAAC TCAATCTCAC CAAAAACAAT GCACTGAAAG AAACATTAAA AACGATTAAA GCGATTAACG ACGCGAAAAT TGCCCGCCCT ATCTCTGGTT GGTCGAGTTT TGTCGGGAGT TTTAATGCCG GGAAATCGGC AAGTGTAGTT TCTGGTGTAT GGGTGATTGG TTCAATTAAA AGCGCTGAAG ATCAGAAAGG AAAATGGCGT GTCGCGCCGA TTCCACGGCT GAACCTCGAC AAAGCGGTAC ATGCCTCCAA TCAGGGGGGA TCGAGCTGGT ATGTCTTAAA GGGCGGTAAA AATACTAAAC AGGCGATCGA GTTTTTGCAG AAAACCTTCG CGGCAGATAG CAATATGTAT CAAACCCTGT TGGTTGATCG TGGTGCGCTT GCCACCTTCC TTCCAGCCAC TTCCGGCCCT GCTTACGCGG TACAGGATCC GTTCTTTGGT GGGCAACCCG TGTTCGCTGA TTTTTCTAAA TGGGTGACTG AAATCCCACA GGTTTCCTAC GGTATGTATA CCCAGGAAGT TGATAACGCC ATTGCTGCTG AAATACCTGC ATTACTGAAA GGCGATTCTG TCGATGACGT TTTAAAACGC GCCGAAACGA CATTAAAAAA TCAGATTATG CAGTAG
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Protein sequence | MKIKNKVSTL FAVSFLTLGL SSHSLAAEVT VWAWDPNFNV AAMHEASSIY KKADPSFSLK VIDSGKEDIE QKLNTMLASG VKNSLPDIVL IEDYNAQKYL QAYPDSFIPL QDAIDYSQFA PYKTKVMTVG NKVYGVPFDS GVAGMFYRLD YLEAAGYKES DMVNITWDKY IEIGKQVKAK TGVDMLTYDM NDVVLPHIMM QSGGEWFFDN QGQLNLTKNN ALKETLKTIK AINDAKIARP ISGWSSFVGS FNAGKSASVV SGVWVIGSIK SAEDQKGKWR VAPIPRLNLD KAVHASNQGG SSWYVLKGGK NTKQAIEFLQ KTFAADSNMY QTLLVDRGAL ATFLPATSGP AYAVQDPFFG GQPVFADFSK WVTEIPQVSY GMYTQEVDNA IAAEIPALLK GDSVDDVLKR AETTLKNQIM Q
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