| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2896 |
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| Symbol | |
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| ID | 5209865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3614809 |
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| End bp | 3616167 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596492 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001277214 |
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| Protein GI | 148657009 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.034507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA AACTCTCACG ACGCAGGTTC CTCAAGGTTG CTGCCGCGGG CGCAGGCGGC
ATTGGTGCAA CGGCGCTGCT GGCGGCTTGT GGCGGCGCAG CGCCTCAGGG CGGTCAACCA
ACGGGCGGGC AGGCGCAACC TGCAGCGCCG GTTCAGGGTG ACACAGTTGT CACGGAAATC
ACCTTCTGGT GGTGGGATCA GGTCGGTGAG GTCTGGAAAG AACCGTTCGA GAAGGCGCAC
CCCAACATCA AACTCAACTT CGTCAACACC CCCTTCGCCG ATGCGCACGA CAAACTTCTG
ACCTCGTTCG CCGCCGGAAG TGGCGCTCCC GATGTCGCCT CGATCGAGAT TGGTCGCGTC
GGCAATTTTA CCGCCAAGGG CGGGCTTGCC GATCTGCTGG CGCCGCCGTT CGATGCGGGC
AGTCTCAAGA ATGATATGGT CGCCTATAAA TGGACCCAGG GATCGACTGC CGATGGTCGC
CTGGTCTGCC TGCCGTGGGA TATCGGTCCT GCTGGGGTCT GGTATCGCAC GGATATTTTC
GAGGCGCTCG GTTTGCCAAC CGAACCGGAA GCGGTAGAGG AGTTGATCGG CGGTCCGAAC
CGCACGTGGG ACGATTTCTT CGCCTTTGCC AAACAACTCA AGGAAAAGAG CGGCGGGAAG
ACGTCCCTCT TTGCCGATGC CGGCACTGAT ATTTATGGCG CCGTCTATCG CCAGCAGGGT
GAGGGGTATG CCGATGGCAA CAAAGTGCTG ATCGAAGAGA AGGCGACCCG TCCGTTCCAG
CTCGCGGCGC GCGCCCGCAA GGAGGGGATC GATGCCAACA TTCCCTGGTG GGGCGCCGAG
TGGCAGACCG GCTTGAAGGA CAATGCCTTT GCCGGAATGG TGATTGCCTG CTGGATGCAG
GGCGGTCTGA CACGCGAGCA GCCCGATCTG GTCGGGAAAT GGCGTGTCAT ACGCGCTCCA
GAAGCCAATT ACAACTGGGG CGGTTCGTTC ATGGCGATCC CGGAGCAGAG CAAGAACAAG
GAGGCGGCCT GGACGTTCGT CAAGTGGGCA TGCGCAACGG CGGAAGGGCA GAACATCATG
TTCAAGGCGT CCGGCGTGTT TCCCGCATAC AAGCCAGCCT GGCAGGATCC ACTCTACGAC
GAACCGGTGC CGTTCTTCGG CGGTCAGCGC GCCTATCGCT TGTGGACCGA AATCGGTGAC
AATATCAAAG CTATCTTCCG TACACCGAAC GATCTCCAGC TCGATGACAT CGTTGGCGCA
GAACTGACGA AGGTCTTGCA GGATGGCAAG GACCCCGTTC AGGCTGCGAA GGACGCCGAA
GCAGAAGCGC TCAGGCGCAT CCCCGATCTG CAAGGATAG
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| Protein sequence | MTTKLSRRRF LKVAAAGAGG IGATALLAAC GGAAPQGGQP TGGQAQPAAP VQGDTVVTEI
TFWWWDQVGE VWKEPFEKAH PNIKLNFVNT PFADAHDKLL TSFAAGSGAP DVASIEIGRV
GNFTAKGGLA DLLAPPFDAG SLKNDMVAYK WTQGSTADGR LVCLPWDIGP AGVWYRTDIF
EALGLPTEPE AVEELIGGPN RTWDDFFAFA KQLKEKSGGK TSLFADAGTD IYGAVYRQQG
EGYADGNKVL IEEKATRPFQ LAARARKEGI DANIPWWGAE WQTGLKDNAF AGMVIACWMQ
GGLTREQPDL VGKWRVIRAP EANYNWGGSF MAIPEQSKNK EAAWTFVKWA CATAEGQNIM
FKASGVFPAY KPAWQDPLYD EPVPFFGGQR AYRLWTEIGD NIKAIFRTPN DLQLDDIVGA
ELTKVLQDGK DPVQAAKDAE AEALRRIPDL QG
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