| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_15040 |
|---|
| Symbol | |
|---|
| ID | 7313097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1606126 |
|---|
| End bp | 1607502 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643611947 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002509249 |
|---|
| Protein GI | 220932341 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.751229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACA AAAAACATTT ATCAACTATT TTAGTGGCTA TATTAGTATT AGGAGCTATC
CTGTATGTTG GTCCTGTAAC TATGGCATGG GGAAATAAAG ATGATTCAGA TGAAGATTTT
GAATGGGTTA CTGCAAATAG AATTGGTAAT CCTGATGCAG AAATTGTCTT AACAGCTAAT
ATACAGAGAT TTGATACTTT AAAAACTCCC TTTGATACTA AAAAAGAATA TATTAAAAAG
GCAGCCACAG CCTGGGCTAA AGAACACCCT AATGTAAGAA TTGATATTGA AGTTGCACCT
GCCGGACAGA CATCAATGAC AATGTCTAAA ATAATGACTC AAGCCATTTC TGGAAATGCA
CCTGATTTTG CCCATATTGA TTCTTTCTGG ATTGGAAGAT TTATTGACCG GGGAATTTTA
CAGCCTTTAA ATGATTATTT ATCTCAAGAG ACTATAGATG ATTTCTATGG TTTTACAAAG
AAAGTGACTA TGAGAGACGG TAAAATGTAT GCTATTTGGG CTCAAACAGA TGCCAGGTTT
TTATATTATA GAAAAGACTG GATAAAAAAT CCTCCTAAAA CATGGGATGA ATTAATTGAA
ACAGCATTGG CAATGAAAGA AAAACACAAC GTTCATGGTT ATCTTGCCTG GTTGGGAACG
TGGGAAGGTG CTGTTAATGG TAATGTATGG CCATATTTCT GGGCTCAAGG TGGAAGAATA
TTTGATGAAT CTGGGAGACC AGTAATTGGT GAAGGTAAGA ACAGAGAGGC TTTAATTAAT
ACATTAGACT TTTTAAATAG ACTGGTTGAC ACTGGAGCAG CTCCCAGAAT GGTTGCTTCT
ATAACAAGTA TTGATCCAAT ACTGGCTGAA GCTAAAGCAA ACAGTGTAGC CATGGTAGCC
AATGGAAACT GGTTTTATGA TATGTTATTG GAGTCTGTTG ATAATGCAGA AGAAAAATGG
GATTTTGTTC CCTTGCCTCA AATGAAAGAA TCCCAGAGAG CTAATAGTAA TGGTGGATGG
ACTTATGCAG TCTTAACAGA TGATCCAGTA AAACAGGAAC TAGCAGTCAG CTATATTATG
GCTGTTCTTG GAAGCAAGGA AGCTATGGGT GAAAGATGTA AGGTATACAA TTATTTACCA
ACAAGAAAAA GTGTGTATAA AGAGTATCCT TATTTTGCAG ATAATCCTGT CCAACAAAGA
TTTGCTAAGG AACTTAAGTA TGGTCATGCT AGACCTTCTA ATTCTTTATA TGGTGAGGTA
TCAGATTTAG TTCAAAAAGA ACTTGGACGA ATTCTTACTG GTCAAACTAC AGTAGAAAAA
GCAGTTGATA AAATACAAAA AGTAGCTTTA CAAGCTTGGA AAGAAAATAA AAGATAG
|
|---|
| Protein sequence | MINKKHLSTI LVAILVLGAI LYVGPVTMAW GNKDDSDEDF EWVTANRIGN PDAEIVLTAN
IQRFDTLKTP FDTKKEYIKK AATAWAKEHP NVRIDIEVAP AGQTSMTMSK IMTQAISGNA
PDFAHIDSFW IGRFIDRGIL QPLNDYLSQE TIDDFYGFTK KVTMRDGKMY AIWAQTDARF
LYYRKDWIKN PPKTWDELIE TALAMKEKHN VHGYLAWLGT WEGAVNGNVW PYFWAQGGRI
FDESGRPVIG EGKNREALIN TLDFLNRLVD TGAAPRMVAS ITSIDPILAE AKANSVAMVA
NGNWFYDMLL ESVDNAEEKW DFVPLPQMKE SQRANSNGGW TYAVLTDDPV KQELAVSYIM
AVLGSKEAMG ERCKVYNYLP TRKSVYKEYP YFADNPVQQR FAKELKYGHA RPSNSLYGEV
SDLVQKELGR ILTGQTTVEK AVDKIQKVAL QAWKENKR
|
|---|
| |