| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4419 |
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| Symbol | |
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| ID | 8335773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5019145 |
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| End bp | 5020515 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957522 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003115124 |
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| Protein GI | 256393560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATAT CCCGTCGACG CGGCGTCCTG CTGGGCGCGA CCGCGCTGGC CGTGGCGCTG
GCCGCGACCG CGTGCTCCAG CTCGGCGAGC AGCGGTGGCA GCGGCAAGAC CTCCTCCGGC
TCCTCGCAGG CCGCCACCGT CACCGACGCC GACCTGCAGG CGGCGCTGAC CGCCGGCGGG
AACCTGACGG TGTGGGCCTG GGAGCCGACC TTGAAGAAGG TCGTCGCCGA CTTCCAGACC
AAGTACCCGA ACGTGCACGT CAACCTGGTC AACGCCGGGA CCGGCAACGA CGAGTACAAG
GCGCTGCAGA ACGCGGTCCA GGCCGGCAAG GGCGTCCCGG ACGTCGCGCA CATCGAGTAC
TACGCGCTGC CGCAGTTCGA GCTGACCAAG TCGGTGGCGA ACCTGGACGA GTTCGGCGCC
GCCGCGCTGA ACGGCACGTT CACCCCCGGG CCGTGGAGCT CGGTCCAGGC CGCCGGCGGC
GTCTACGGCC TGCCGATGGA CTCCGGACCG ATGGCGCTGT TCTACAACCA GACGGTCTTC
ACCAAGTTCG GCATCACCAC GCCCCCGGCC ACGTGGGACG AGTACATCGC CGACGCCAAG
AAGATCCACA CCGCCGACCC CAGCGTCTAC ATGACCAACG ACACCGGCGA CGCCGGCTTC
ACCACCAGCA TGATCTGGCA GGCCGGCGGC AAGCCCTACT CGGTCAGCGG CACCACCCTC
GGTGTGAACT TCGCCGGCGA CGCCGGCACG CAGAAGTTCG CGACCGCCTG GCAGCAGCTG
CTGGACGGCC ACGACCTGGC GCCGATCAGC TCCTGGAGCG ACGCCTGGTA CCAGGGCATG
GCCTCGGGCA AGATCGCCTC GCTGACCATC GGCGCCTGGA TGCCGGCCTC CCTGGAGTCC
GGCGTGAAGT CCGGCTCCGG CCAGTGGCGC GTCGCCCCGA TGCCGCAGTG GACCGCCGGG
GGCAAGGTCA CCTCCGAGAA CGGCGGCAGC TCCCTGGCCG TGATGAAGGC GAGCACCAAC
CAGAAGCTGG CCTACGCGTT CCTGAAGTAC GCCACCGTGG ACGAGGGCGC GCAGACCCGC
GTGGACAACG GCGCCTTCCC GGCCACGGTG AAGCAGCTGA ACTCCCCGGA CTTCCTGAAC
AAGACCGACG CCTACTTCGG CGACCAGAAG ATCAACCAGG TGCTCGCACA GAGCGCCGCC
GAGGTCGCCC CGGGCTGGTC CTACCTGCCC TTCCAGGTCT ACGCCAACAG CGTCTTCAAC
GACACCGCCG GCAAGGCCTA CATCGGGTCC TCCTCCCTGG CCGACGGGCT GAAGGCCTGG
CAGGACGCCT CGATCAAGTA CGCCAAGGAC CAGGGCTTCA CCGTCAAGTA G
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| Protein sequence | MTISRRRGVL LGATALAVAL AATACSSSAS SGGSGKTSSG SSQAATVTDA DLQAALTAGG
NLTVWAWEPT LKKVVADFQT KYPNVHVNLV NAGTGNDEYK ALQNAVQAGK GVPDVAHIEY
YALPQFELTK SVANLDEFGA AALNGTFTPG PWSSVQAAGG VYGLPMDSGP MALFYNQTVF
TKFGITTPPA TWDEYIADAK KIHTADPSVY MTNDTGDAGF TTSMIWQAGG KPYSVSGTTL
GVNFAGDAGT QKFATAWQQL LDGHDLAPIS SWSDAWYQGM ASGKIASLTI GAWMPASLES
GVKSGSGQWR VAPMPQWTAG GKVTSENGGS SLAVMKASTN QKLAYAFLKY ATVDEGAQTR
VDNGAFPATV KQLNSPDFLN KTDAYFGDQK INQVLAQSAA EVAPGWSYLP FQVYANSVFN
DTAGKAYIGS SSLADGLKAW QDASIKYAKD QGFTVK
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