Gene Bfae_04000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_04000 
Symbol 
ID8398948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp459175 
End bp460512 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content69% 
IMG OID644996488 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_003153863 
Protein GI257067608 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTG CCACCCCATC CCGGCAGGGA TGGCGCCCGT CGCGGCGCCA GCTGCTGCGG 
TCCGGAGCCG GCCTCGGCGC CGCCGGACTG GCCGGCGGAG CCCTTGCAGG CTGCGGATCG
GCATCCTCTT CGGCGCCGGT GGAGCTGACC TTCTGGACGT GGGCGCCGGG CATCGAAGAG
GTGGTGGCGC TCTGGAATCA GCAGAATCCG GACGTGCAGG TGCTCGTGAG CAGGCAGGAC
GCGGGCGACG CCGCTGTGAC GAAGCTGCTC ACGGCAGTGC GCGCGGGGAA CGGTGCCCCG
GACGTCGTCC AGGCCGAGTA CCAGAGCATC ACCTCCCTGG TCGCCTTCGA CGCGATCGCT
GACATCGCCG CGGATCTCGA TCCCGGCACG GTGGAACATT TCGCCGAGGG CATCTGGTCC
TCCGTCGGCA TCGGCGACGG CGGGGTCTAC GCGATCCCGC AGGACACCGG CCCGTTGCAG
TTCTACTATC GCGAGGACAT CTTCGAGGAT CTGGGATTGT CCGGCCCCGA GACCTGGGAC
GAGTACGCCG AGGCGGCGCG CGTGGTCCAT GACGCTGATC CCTCGATGTA CCTGGGCACC
TTCTCCTCGA CCGATCCAGG CCTGTTCGTG GGCCTGGCGC AGCAGGCCGG AGCCTCATGG
TGGGAGATCG AGGGCGAACG CTGGAAGGTC GAGATCGATG CTGAGCCCAC CCGCCGGGTG
GCTGAGTTCT GGGGCGGGCT GGTCGAGGAA GGGGCCATCT CCACCGAGCC GATGTACACC
CCGCAGTGGA ACGCGGCCCT GAACGATGGC ACCCAGATCG GCTGGGTGTC CGCGGCCTGG
GCGCCCGGCG TGCTCGAGGG CAACGCCGGC AGCACGGCCG GATCCTGGCG GATGTCCACC
ATCCCGCAGT GGGAGCCGGG CGCGAACGCC ACCGGCAACT GGGGCGGCTC GGCAACGTCC
GTGGTGGTCG GCAGCGACCA CCAGGCCGAA GCCGTGCGCT TCGCGGAATG GATGAACACC
TCGGCCGAGG GGGTGCTCGC CCTCGTGGAG GACAGCGGCG TCTTCCCGGC GGATCTGGCC
AACGCGGAGG CCGCGCTCGA GGCGCCGCCG GAGTTCTTTT CCCATCAACC CGACTTCTAC
GAGCGCTCCA CGCACAACGC GGACGGGGTG GAGCCCTTCA CCTTCGGCCC GAACGTCAAC
GTCACCTATT CGCTGTTCAA TGACGCCTTC GGGATCGCGA CCCGGACCGC GACCGCCGCC
GCCTTCGAGG AGGCGGTCAC GACCGTGCAC GAGGGCACCG TCGCCGATCT CGAGAACCAG
GGGTACGACC TCGCATGA
 
Protein sequence
MISATPSRQG WRPSRRQLLR SGAGLGAAGL AGGALAGCGS ASSSAPVELT FWTWAPGIEE 
VVALWNQQNP DVQVLVSRQD AGDAAVTKLL TAVRAGNGAP DVVQAEYQSI TSLVAFDAIA
DIAADLDPGT VEHFAEGIWS SVGIGDGGVY AIPQDTGPLQ FYYREDIFED LGLSGPETWD
EYAEAARVVH DADPSMYLGT FSSTDPGLFV GLAQQAGASW WEIEGERWKV EIDAEPTRRV
AEFWGGLVEE GAISTEPMYT PQWNAALNDG TQIGWVSAAW APGVLEGNAG STAGSWRMST
IPQWEPGANA TGNWGGSATS VVVGSDHQAE AVRFAEWMNT SAEGVLALVE DSGVFPADLA
NAEAALEAPP EFFSHQPDFY ERSTHNADGV EPFTFGPNVN VTYSLFNDAF GIATRTATAA
AFEEAVTTVH EGTVADLENQ GYDLA