Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2574 |
Symbol | |
ID | 8326763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2906250 |
End bp | 2907599 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644943116 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003100357 |
Protein GI | 256376697 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.316894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACCA CCAGCCGCCG CGCGCGGGTG GCCGTGGCGA TGGCCGCCGC GCTCACCACC GCGCTCACCG CCTGCTCCTC CGGCGACACC GCCGCGAACC AGCCGGCGGG CATGACCGGC ACCGCTGACG CCGTCGACGC CGCCCTGAAG GCCGGTGGCG AGATCACCTA CTGGAGCTGG ACCCCTTCGG CGCAGGCGCA GGTCGACGCC TTCATGAAGG AGTACCCGCA GGTCAAGGTG AACTACGTCA ACGCGGGCAC CAACAAGGAC CAGTACACCA AGCTGCAGAA CGCGATCAAG GCCGGCTCGG GCGCGCCCGA CGTGGCCCAG GTCGAGTACC AGGCCCTGCC GCAGTTCGCG ATGACCGACT CGCTGCTGGA CCTCGGCCAG TTCGGGTTCA ACGAGTACGA GAAGGACTAC ACCGCCTCCA CCTGGAACTC GGTGAAGGTC GGCGGCGGCC TGTTCGGCCT GCCGCAGGAC TCGGGCCCCA TGGCGATGTT CTACAACAAG GAGGTGTTCG ACCAGTACCA GATCCAGGTC CCCAAGACCT GGGACGAGTA CGTCGCCGCC GCCGAGAAGC TGAACGCCGC GGACCCCACC AAGTTCATCA CCGCGGACTC CGGTGACGCC GGCTTCGCCA CCAGCATGAT CTGGCAGGCG GGCGGCAAGC CGTTCACCGT CGACGGCACC AACGTCAAGG TGAACCTGCA GGACGAGGGC GCCAAGAAGT GGACCGAGAC CTGGAACAAG CTGGTCTCCA AGAAGCTCAC CGCGCCCACC ATCACCGGCT GGTCGGACGA GTGGTACCGG GGCCTGGGCA ACGGCAGCAT CGTCACGATG ATCAACGGCG CCTGGATGCC CGGCATCCTC GAGGCCTCCG TGCCTGACGG CAAGGGCAAG TGGGCCGTGG CCCCGATGCC GACCTACGAC GGCAAGCCCG CGACCGCCGA GAACGGCGGC GGCGGCCAGT CCGTCATCAA GCAGAGCGCC AACCCCGCGC TCGCGGCGGG CTTCGTGCGC TGGCTGAACC ACGAGCAGGG CGGCATCGAC AAGTTCATCG AGTTCGGCGG CTTCCCGGCC ACCACCAAGG AGCTCGAGTC GGACGCGTTC CTGAACGCCG AGTCCGCGTA CTTCGGCGGC CAGAAGATCA ACCAGGTCCT CTCGCAGGCG GGCAAGGACG TCGTGAAGGG CTGGGAGTAC CTGCCGTTCC AGCTGTACGC CAACAGCATC TTCAACGACA ACGCCGGTAG CGCCTACGCC AACGCCAGCG ACCTGAACGC GGGTCTGGCC TCCTGGCAGA AGGCCATCAC CGAGTACGGC AACCAGCAGG GCTTCACCGT CACCAACTGA
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Protein sequence | MSTTSRRARV AVAMAAALTT ALTACSSGDT AANQPAGMTG TADAVDAALK AGGEITYWSW TPSAQAQVDA FMKEYPQVKV NYVNAGTNKD QYTKLQNAIK AGSGAPDVAQ VEYQALPQFA MTDSLLDLGQ FGFNEYEKDY TASTWNSVKV GGGLFGLPQD SGPMAMFYNK EVFDQYQIQV PKTWDEYVAA AEKLNAADPT KFITADSGDA GFATSMIWQA GGKPFTVDGT NVKVNLQDEG AKKWTETWNK LVSKKLTAPT ITGWSDEWYR GLGNGSIVTM INGAWMPGIL EASVPDGKGK WAVAPMPTYD GKPATAENGG GGQSVIKQSA NPALAAGFVR WLNHEQGGID KFIEFGGFPA TTKELESDAF LNAESAYFGG QKINQVLSQA GKDVVKGWEY LPFQLYANSI FNDNAGSAYA NASDLNAGLA SWQKAITEYG NQQGFTVTN
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