More than 300 homologs were found in PanDaTox collection
for query gene MADE_00464 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  100 
 
 
636 aa  1288    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
638 aa  545  1e-154  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  45.04 
 
 
636 aa  543  1e-153  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
638 aa  538  9.999999999999999e-153  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  44.64 
 
 
642 aa  531  1e-149  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
641 aa  523  1e-147  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
638 aa  523  1e-147  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  42.68 
 
 
639 aa  523  1e-147  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
638 aa  523  1e-147  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
638 aa  523  1e-147  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
638 aa  521  1e-146  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  43.69 
 
 
638 aa  520  1e-146  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  43.53 
 
 
638 aa  516  1.0000000000000001e-145  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  42.43 
 
 
638 aa  518  1.0000000000000001e-145  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
638 aa  510  1e-143  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  43.46 
 
 
638 aa  489  1e-137  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  41.96 
 
 
636 aa  488  1e-136  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  42.32 
 
 
638 aa  480  1e-134  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  41.85 
 
 
650 aa  457  1e-127  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
641 aa  420  1e-116  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
640 aa  355  1e-96  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
640 aa  332  2e-89  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  34.26 
 
 
641 aa  325  2e-87  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  33.64 
 
 
645 aa  313  3.9999999999999997e-84  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
645 aa  302  1e-80  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
645 aa  299  1e-79  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
645 aa  297  3e-79  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
645 aa  298  3e-79  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
643 aa  286  7e-76  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  33.83 
 
 
639 aa  254  3e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
631 aa  249  1e-64  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.09 
 
 
630 aa  247  4.9999999999999997e-64  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
628 aa  244  3e-63  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  32.42 
 
 
643 aa  244  3.9999999999999997e-63  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.69 
 
 
628 aa  244  5e-63  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  32.28 
 
 
629 aa  243  7e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  32.28 
 
 
629 aa  243  7e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  40.43 
 
 
548 aa  241  2e-62  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  30.37 
 
 
630 aa  241  2.9999999999999997e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
636 aa  238  2e-61  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  33.33 
 
 
633 aa  238  2e-61  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  28.19 
 
 
648 aa  238  3e-61  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.94 
 
 
626 aa  237  5.0000000000000005e-61  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
637 aa  236  1.0000000000000001e-60  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  32.52 
 
 
632 aa  236  1.0000000000000001e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.72 
 
 
630 aa  235  2.0000000000000002e-60  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  33.13 
 
 
632 aa  235  2.0000000000000002e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
630 aa  235  2.0000000000000002e-60  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  33.19 
 
 
629 aa  235  2.0000000000000002e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
630 aa  235  2.0000000000000002e-60  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
630 aa  234  2.0000000000000002e-60  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
630 aa  234  3e-60  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
630 aa  234  3e-60  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  33.47 
 
 
629 aa  234  5e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  31.76 
 
 
630 aa  233  7.000000000000001e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.7 
 
 
629 aa  231  2e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  31.26 
 
 
671 aa  231  3e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  32.84 
 
 
626 aa  231  3e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  39.88 
 
 
637 aa  230  5e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  33.12 
 
 
627 aa  230  6e-59  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  31.9 
 
 
629 aa  230  8e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  33.92 
 
 
712 aa  229  9e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  32.91 
 
 
627 aa  229  1e-58  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  29.03 
 
 
634 aa  228  3e-58  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  33.7 
 
 
712 aa  228  3e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  30.37 
 
 
630 aa  227  4e-58  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.51 
 
 
629 aa  226  8e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  33.76 
 
 
626 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  31.84 
 
 
713 aa  226  1e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
630 aa  226  1e-57  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  30.58 
 
 
630 aa  224  4.9999999999999996e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  36.8 
 
 
564 aa  223  6e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
625 aa  223  7e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.62 
 
 
626 aa  222  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2357  methyl-accepting chemotaxis sensory transducer  26.95 
 
 
620 aa  222  9.999999999999999e-57  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
568 aa  223  9.999999999999999e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.01 
 
 
541 aa  223  9.999999999999999e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
541 aa  221  1.9999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  29.2 
 
 
623 aa  222  1.9999999999999999e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  31.47 
 
 
629 aa  221  1.9999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3723  HAMP domain-containing protein  28.45 
 
 
628 aa  221  1.9999999999999999e-56  Cupriavidus metallidurans CH34  Bacteria  normal  0.21159  normal  0.539738 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  26.64 
 
 
620 aa  221  3e-56  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  26.64 
 
 
620 aa  221  3e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  31.19 
 
 
690 aa  221  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  31.1 
 
 
624 aa  221  3.9999999999999997e-56  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  41.16 
 
 
519 aa  221  3.9999999999999997e-56  Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  26.86 
 
 
620 aa  221  3.9999999999999997e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.67 
 
 
624 aa  220  6e-56  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  38.59 
 
 
634 aa  219  1e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
716 aa  218  2e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  30.25 
 
 
628 aa  218  2.9999999999999998e-55  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
548 aa  218  2.9999999999999998e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  30.37 
 
 
626 aa  217  4e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
624 aa  217  5e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.77 
 
 
624 aa  217  5e-55  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
634 aa  217  5e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  38.35 
 
 
539 aa  217  7e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  41.39 
 
 
548 aa  216  9.999999999999999e-55  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
541 aa  216  9.999999999999999e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  32.65 
 
 
652 aa  216  9.999999999999999e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>