292 homologs were found in PanDaTox collection
for query gene Fjoh_4871 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  100 
 
 
208 aa  432  1e-120  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  51.47 
 
 
212 aa  228  4e-59  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  38.12 
 
 
212 aa  168  7e-41  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  38.12 
 
 
211 aa  166  2e-40  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  42.86 
 
 
208 aa  164  1.0000000000000001e-39  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  32.82 
 
 
283 aa  152  2.9999999999999998e-36  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  37.76 
 
 
210 aa  152  4e-36  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  34.27 
 
 
213 aa  120  1.9999999999999998e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  30.65 
 
 
201 aa  118  6e-26  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  32.18 
 
 
216 aa  112  3e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  30.22 
 
 
229 aa  108  5e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  32.34 
 
 
227 aa  107  9.000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  27.94 
 
 
222 aa  105  6e-22  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  28.22 
 
 
228 aa  102  3e-21  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  29.21 
 
 
230 aa  102  3e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  26.63 
 
 
218 aa  100  1e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  26.9 
 
 
225 aa  101  1e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  26.63 
 
 
218 aa  100  1e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  28.41 
 
 
240 aa  100  2e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  27.66 
 
 
221 aa  98.2  7e-20  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  29.05 
 
 
223 aa  96.3  3e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  29.21 
 
 
224 aa  95.1  6e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  28.1 
 
 
235 aa  94.4  1e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  26.26 
 
 
220 aa  93.6  2e-18  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  26.7 
 
 
229 aa  91.7  7e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  24.26 
 
 
224 aa  90.9  1e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  27.12 
 
 
222 aa  89.7  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  25.84 
 
 
220 aa  87.8  1e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  25.84 
 
 
231 aa  87.8  1e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  23.92 
 
 
247 aa  87.4  1e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  26.82 
 
 
224 aa  86.7  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  25.62 
 
 
224 aa  84  0.000000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  26.26 
 
 
223 aa  82.8  0.000000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  28.49 
 
 
224 aa  80.9  0.00000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  23.9 
 
 
243 aa  73.6  0.000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  22.44 
 
 
227 aa  72.4  0.000000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  23.41 
 
 
224 aa  72.4  0.000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  24.88 
 
 
212 aa  71.2  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  26.53 
 
 
222 aa  68.9  0.00000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  22.5 
 
 
201 aa  67  0.0000000002  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  23.9 
 
 
219 aa  67  0.0000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  23.19 
 
 
250 aa  66.6  0.0000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.66 
 
 
225 aa  65.9  0.0000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  24.72 
 
 
224 aa  65.1  0.0000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  23.94 
 
 
227 aa  65.1  0.0000000008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  24.72 
 
 
218 aa  63.9  0.000000001  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  21.94 
 
 
218 aa  64.3  0.000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  24.17 
 
 
222 aa  63.2  0.000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  25.4 
 
 
226 aa  62  0.000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  23.6 
 
 
218 aa  61.6  0.000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  21.36 
 
 
267 aa  61.6  0.000000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  25.77 
 
 
222 aa  60.8  0.00000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  23.33 
 
 
222 aa  61.2  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  21.57 
 
 
227 aa  60.8  0.00000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  23.81 
 
 
225 aa  60.1  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010524  Lcho_0903  Crp/FNR family transcriptional regulator  22.58 
 
 
287 aa  60.1  0.00000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  21.53 
 
 
223 aa  59.3  0.00000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  19.21 
 
 
236 aa  58.9  0.00000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  24.52 
 
 
225 aa  58.2  0.00000008  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  20.98 
 
 
226 aa  57.8  0.0000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  25.97 
 
 
226 aa  58.2  0.0000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_011830  Dhaf_0880  transcriptional regulator, Crp/Fnr family  22.39 
 
 
219 aa  58.2  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.812688  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  20.99 
 
 
228 aa  57.8  0.0000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  24.27 
 
 
236 aa  57  0.0000002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  22.6 
 
 
232 aa  57  0.0000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  22.86 
 
 
223 aa  57.4  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  25 
 
 
234 aa  56.6  0.0000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  22.66 
 
 
239 aa  55.8  0.0000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  23.74 
 
 
234 aa  55.8  0.0000005  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  20.73 
 
 
229 aa  55.5  0.0000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_010002  Daci_0775  Crp/FNR family transcriptional regulator  20.83 
 
 
237 aa  55.1  0.0000008  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  25.26 
 
 
236 aa  54.7  0.0000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  22.58 
 
 
236 aa  54.3  0.000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  23.41 
 
 
236 aa  53.9  0.000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  24.62 
 
 
224 aa  54.3  0.000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_011830  Dhaf_0705  cyclic nucleotide-binding protein  22.58 
 
 
227 aa  53.9  0.000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  20.67 
 
 
231 aa  53.5  0.000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  21.53 
 
 
239 aa  53.9  0.000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  20.97 
 
 
225 aa  52.8  0.000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  20.97 
 
 
225 aa  52.8  0.000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2153  transcriptional regulator, Crp/Fnr family  23.3 
 
 
216 aa  53.1  0.000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0015242 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  22.28 
 
 
224 aa  53.1  0.000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  22.58 
 
 
233 aa  53.1  0.000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  24.59 
 
 
224 aa  52.8  0.000003  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  22.58 
 
 
233 aa  53.1  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  21.57 
 
 
227 aa  53.1  0.000003  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  22.9 
 
 
236 aa  53.1  0.000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  21.11 
 
 
254 aa  53.1  0.000003  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  20.3 
 
 
223 aa  53.1  0.000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  20 
 
 
229 aa  53.1  0.000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  21.46 
 
 
261 aa  53.1  0.000003  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  23.37 
 
 
228 aa  52.4  0.000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  21.43 
 
 
221 aa  52.8  0.000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  25 
 
 
221 aa  52.4  0.000004  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  20.73 
 
 
254 aa  52.4  0.000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  20.3 
 
 
231 aa  52.4  0.000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  24.14 
 
 
237 aa  52.4  0.000005  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  21.11 
 
 
238 aa  52  0.000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  20.43 
 
 
225 aa  52  0.000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  21.11 
 
 
238 aa  51.6  0.000008  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
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