Gene Rcas_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0252 
Symbol 
ID5537714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp309959 
End bp310615 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID640892416 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001430403 
Protein GI156740274 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000185636 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.131428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CTACAGAATT GAGACACTTT CCACTCTTTG CGGCGCTGGA TGATCGCGCG 
CTGGCAGATG CAGCGCGCCT TATGGAGTCG CGCACGTATC GTCCTGGTGA ATACATCGCC
TACGAGGGAG AACGACCGGC TGGCGTGTAT TTTGTGCAGC GCGGCAGGGT GCGTTTATCG
CGCACCGCGC CGGACGGTCG CGAGCAGGTG CTGGCGATGG TCGGCGCTGG CGAAAACTTC
AATGCCGTCG CAATCTTCGA CAGCCATGGC AACCTGACGA CAGCGCGCGC GATGAGTCTG
GTTCAATGCC TGATCTTGCC AGGGGATGCG CTGATCACCC TCATTCGCCG TCACCCCGAC
CTGGCGCTGG CGATGCTGCG CGAAATGGCG GGGCAACTGC GCAACCTGGC TGTGCTGGTC
GAAGACCTGG CATTCCGGTC GGTGCGCGAG CGACTGGCGC GCGAACTCTT GCGTGAGGCG
CGTGAAGGCG CCGCCGAACT GACCCATCAG GAACTTGCAG AACGCACAGC CACCGTGCGC
GAGATCGCCG GACGGGCGCT GCGCCAGCTG GCACAGGAAG GACTCGTGCG GTTGGAGCGC
GGGCGCGTGG TGGTGCTCGA CCCGGACGGG CTGGCGCGCA TCGGGGATGG CGAGTGA
 
Protein sequence
MTTPTELRHF PLFAALDDRA LADAARLMES RTYRPGEYIA YEGERPAGVY FVQRGRVRLS 
RTAPDGREQV LAMVGAGENF NAVAIFDSHG NLTTARAMSL VQCLILPGDA LITLIRRHPD
LALAMLREMA GQLRNLAVLV EDLAFRSVRE RLARELLREA REGAAELTHQ ELAERTATVR
EIAGRALRQL AQEGLVRLER GRVVVLDPDG LARIGDGE