Gene Dbac_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2118 
Symbol 
ID8377793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2427043 
End bp2427726 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID645001341 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003158618 
Protein GI256829890 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.545546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCA TGACCACCAT GGCCGGGAGC ACGCTCTTCA AGGGCCTGCC CGAGGATGAG 
CTGCGGCAGC TGGAGCGCAT CAGCGAGCCG CGCGAGTTTG ACAAGGGCGA CATTCTTTTC
CTGGAGGGCA GGGAAGGCGT GGGGTTTTAT GTCGTGGCCG CAGGCCAGGT GAAGGTCTTC
AAGATGTCCT TCGACGGCCG GGAGCAGATC CTGCACATTC TGGGGCCCGG CGACCCCCTG
GGCGAGGTGC CGGTCTTTGC CGGGCAGACC TACCCGGCCA ATGCCCAGGC CTTGGTGAAG
TCGAGCCTGT ACTTCTTTCC CCGCCAGAAA CTCATCGAAC TGTACCGCGA GAGCCCGTCC
CTGGCCATGA ACATGCTGGC CGTGCTGTCG CGGCGATTGC GCGAGTTCAC GGTCCTGATC
GAAAATCTGT CGTTAAAGGA GATCCCGCAA CGCCTGGCCA CCTACCTGCT GCACCAGCAG
TCCCTCAAAC CCGTCTCGGC GCGGGTCAAG CTCAGCGTGA CCAAGGGGGT GCTCTCCAAC
ATCCTGGGCA CGTCCCAGGA GACGCTCTCG CGCGTGCTGG GCAAGCTCAG CCAGGAGGGG
CTGATCGATG TGCAGGGCAA GGAGATCAGC ATCCTGAACG CGGAGCGGTT GCAGGAATTG
GCGGGCGGGG AGATCAGACT GTAG
 
Protein sequence
MDFMTTMAGS TLFKGLPEDE LRQLERISEP REFDKGDILF LEGREGVGFY VVAAGQVKVF 
KMSFDGREQI LHILGPGDPL GEVPVFAGQT YPANAQALVK SSLYFFPRQK LIELYRESPS
LAMNMLAVLS RRLREFTVLI ENLSLKEIPQ RLATYLLHQQ SLKPVSARVK LSVTKGVLSN
ILGTSQETLS RVLGKLSQEG LIDVQGKEIS ILNAERLQEL AGGEIRL