Gene Cpin_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0678 
Symbol 
ID8356790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp818143 
End bp818853 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID644962830 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003120377 
Protein GI256419724 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0236133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTACGC CTTACCATAA TGCCTCATGT GCGAATTGCC AGGACCGCTT TGGATCAATT 
TTATTCAAGG CAGAGAAGTG TAATCTGGAA GAGATAGAGT CCGCAAAAGT TTGTACTACT
TACAAAAAAG GACAGATCGT TTTCCAGGAA GGCGCTTACC CGTTCGGCAT TTATTGCGTA
AATACAGGCA AGATAAAATT ATCCCACTGC GGAGATGATG GCCGCGAACA AATCGTTCGT
CTGGCCAAAC CCGGCGATAT TATAGGTTAT AAAGCGCTGC TCAGCGCCGA ACGATATACA
GCTTCGGCAA TAGCCCTCGA CGACTCCTCC GTCTGCTTCA TTCCAAAAGA TCTTTTCATG
AGCGTGTTGC AGAAAGATGC CAGCCTTTCC CTGGAAATGA TGCGCATTCT CGCCAGTGAA
CTCAGAAAAG CCGAAATGAA GATCACGCAC CTGGCACAAA AACCTGTGCG TGAACGCCTC
GCCGAAACAC TTCTTTTCAT CAGAGAAACC TATGGGGTAG AACAGGATGG CAGCACCCTC
AACGTTCGCC TTTCCCGCGA AGAGATCGCC AACCTGGTCG GAACAGCCAC TGAATCGGCC
ATCCGCCTGC TGTCTGAATT TAAAAAAGAT GGTCTTATTG AGCTCCAGGG CAAAAAAATC
CGCCTGCTGA ATCCGGAAGA ACTGACCCGG ACCGCCAACC TGCAGGATTA A
 
Protein sequence
MCTPYHNASC ANCQDRFGSI LFKAEKCNLE EIESAKVCTT YKKGQIVFQE GAYPFGIYCV 
NTGKIKLSHC GDDGREQIVR LAKPGDIIGY KALLSAERYT ASAIALDDSS VCFIPKDLFM
SVLQKDASLS LEMMRILASE LRKAEMKITH LAQKPVRERL AETLLFIRET YGVEQDGSTL
NVRLSREEIA NLVGTATESA IRLLSEFKKD GLIELQGKKI RLLNPEELTR TANLQD