Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0678 |
Symbol | |
ID | 8356790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 818143 |
End bp | 818853 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962830 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003120377 |
Protein GI | 256419724 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0236133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTACGC CTTACCATAA TGCCTCATGT GCGAATTGCC AGGACCGCTT TGGATCAATT TTATTCAAGG CAGAGAAGTG TAATCTGGAA GAGATAGAGT CCGCAAAAGT TTGTACTACT TACAAAAAAG GACAGATCGT TTTCCAGGAA GGCGCTTACC CGTTCGGCAT TTATTGCGTA AATACAGGCA AGATAAAATT ATCCCACTGC GGAGATGATG GCCGCGAACA AATCGTTCGT CTGGCCAAAC CCGGCGATAT TATAGGTTAT AAAGCGCTGC TCAGCGCCGA ACGATATACA GCTTCGGCAA TAGCCCTCGA CGACTCCTCC GTCTGCTTCA TTCCAAAAGA TCTTTTCATG AGCGTGTTGC AGAAAGATGC CAGCCTTTCC CTGGAAATGA TGCGCATTCT CGCCAGTGAA CTCAGAAAAG CCGAAATGAA GATCACGCAC CTGGCACAAA AACCTGTGCG TGAACGCCTC GCCGAAACAC TTCTTTTCAT CAGAGAAACC TATGGGGTAG AACAGGATGG CAGCACCCTC AACGTTCGCC TTTCCCGCGA AGAGATCGCC AACCTGGTCG GAACAGCCAC TGAATCGGCC ATCCGCCTGC TGTCTGAATT TAAAAAAGAT GGTCTTATTG AGCTCCAGGG CAAAAAAATC CGCCTGCTGA ATCCGGAAGA ACTGACCCGG ACCGCCAACC TGCAGGATTA A
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Protein sequence | MCTPYHNASC ANCQDRFGSI LFKAEKCNLE EIESAKVCTT YKKGQIVFQE GAYPFGIYCV NTGKIKLSHC GDDGREQIVR LAKPGDIIGY KALLSAERYT ASAIALDDSS VCFIPKDLFM SVLQKDASLS LEMMRILASE LRKAEMKITH LAQKPVRERL AETLLFIRET YGVEQDGSTL NVRLSREEIA NLVGTATESA IRLLSEFKKD GLIELQGKKI RLLNPEELTR TANLQD
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