| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2153 |
|---|
| Symbol | |
|---|
| ID | 7267661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2643274 |
|---|
| End bp | 2643924 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643566985 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_002463473 |
|---|
| Protein GI | 219849040 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0015242 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTG AGGACCTTCG CTCGATTCCA TTATTTTCTA GCCTCGATGA AGCAACTCTG
GCCGACACCG CACGGCGAGC CCAGATTTGC TACTATCGCC CCGGTCAGCA TATCATACAC
GAAGATCAGC CAGCTCATGC CATTTTCTTT GTACTGCGTG GTCGGGTACG GCTATCGCGC
ACGGCACCTG ACGGTCGCGA ACAGGTATTG GCGATGGTTG GGCCGGGCGC ATACTTTAAC
GCTGTACCGA TCTTCGACAG AGGGCCTAGT CCGGCGACAG CACGGGCAAT GAGTCAGGTG
ACCTGTGTGC TTCTTTCCCG TGATGATCTG TTAGCCCTCA TCCGCAAGCA TCCCGACCTG
GCGCTGGCAG CCCTCGCCGA TCTTGCCGGT CAATTGCGTG AGTTAGTGAC GTTAGTCGAA
GATCTCGCCT TTCGTTCAGT ACGCGCACGC TTAGCCCGTC TCTTACTCGC TGAAGCGTCA
AGTGGTACTG CTGAGGTGAC CCAACAGGAA TTGGCCGAAC GCACCGGTAC GGTTCGCGAA
ATTGCCGGTC GTGCGTTACG CCGGATGGCC GAAGAACGCC TCGTGAAACT CGAGCGGGGC
CGGGTGATCG TGCTAGACCG AGTACGCCTG GCTCAGGTCG CCGAGGAGTA G
|
|---|
| Protein sequence | MTIEDLRSIP LFSSLDEATL ADTARRAQIC YYRPGQHIIH EDQPAHAIFF VLRGRVRLSR
TAPDGREQVL AMVGPGAYFN AVPIFDRGPS PATARAMSQV TCVLLSRDDL LALIRKHPDL
ALAALADLAG QLRELVTLVE DLAFRSVRAR LARLLLAEAS SGTAEVTQQE LAERTGTVRE
IAGRALRRMA EERLVKLERG RVIVLDRVRL AQVAEE
|
|---|
| |