More than 300 homologs were found in PanDaTox collection
for query gene DvMF_0993 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  100 
 
 
229 aa  460  1e-129  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  72.52 
 
 
228 aa  335  3.9999999999999995e-91  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  68.14 
 
 
248 aa  313  1.9999999999999998e-84  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  50.93 
 
 
227 aa  217  1e-55  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  46.43 
 
 
228 aa  217  1e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  48.83 
 
 
227 aa  214  9.999999999999999e-55  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  43.84 
 
 
231 aa  196  2.0000000000000003e-49  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  46.12 
 
 
226 aa  194  1e-48  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  41.86 
 
 
236 aa  181  1e-44  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  42.41 
 
 
227 aa  180  2e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  42.79 
 
 
241 aa  179  4e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  43.12 
 
 
224 aa  178  4.999999999999999e-44  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  41.96 
 
 
227 aa  178  8e-44  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  42.33 
 
 
229 aa  177  1e-43  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  41.94 
 
 
230 aa  173  1.9999999999999998e-42  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  42.66 
 
 
229 aa  168  6e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  40.99 
 
 
229 aa  166  2.9999999999999998e-40  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  36.82 
 
 
227 aa  164  1.0000000000000001e-39  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  38.46 
 
 
238 aa  139  3e-32  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  37.04 
 
 
227 aa  139  3.9999999999999997e-32  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  31.53 
 
 
226 aa  138  8.999999999999999e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  36.32 
 
 
226 aa  136  2e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  34.7 
 
 
232 aa  133  3e-30  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  36.07 
 
 
243 aa  129  3e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  30.43 
 
 
219 aa  127  1.0000000000000001e-28  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  28.44 
 
 
225 aa  127  2.0000000000000002e-28  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  30.77 
 
 
225 aa  126  2.0000000000000002e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  36.74 
 
 
241 aa  124  9e-28  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  33.94 
 
 
234 aa  124  1e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  33.49 
 
 
225 aa  122  3e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  31.1 
 
 
245 aa  123  3e-27  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  36.11 
 
 
224 aa  122  3e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  30.19 
 
 
243 aa  120  9.999999999999999e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  32.59 
 
 
228 aa  121  9.999999999999999e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32.26 
 
 
226 aa  121  9.999999999999999e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  34.11 
 
 
254 aa  119  3e-26  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  30.95 
 
 
226 aa  119  3e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  31.19 
 
 
243 aa  119  4.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  30.09 
 
 
223 aa  118  9e-26  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30.81 
 
 
224 aa  118  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  30.77 
 
 
226 aa  117  9.999999999999999e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  32.72 
 
 
226 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  31.82 
 
 
226 aa  117  1.9999999999999998e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  32.73 
 
 
225 aa  116  3e-25  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  31.31 
 
 
229 aa  115  3.9999999999999997e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  31.31 
 
 
229 aa  115  5e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  31.31 
 
 
229 aa  115  5e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  29.78 
 
 
227 aa  115  5e-25  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  31.31 
 
 
229 aa  115  5e-25  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  31.31 
 
 
230 aa  115  5e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  31.31 
 
 
230 aa  115  5e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  31.31 
 
 
230 aa  115  5e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  31.31 
 
 
230 aa  115  5e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  29.91 
 
 
253 aa  115  6e-25  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  31.02 
 
 
234 aa  114  8.999999999999998e-25  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.96 
 
 
231 aa  114  1.0000000000000001e-24  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  31.02 
 
 
242 aa  114  1.0000000000000001e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  30.8 
 
 
228 aa  113  2.0000000000000002e-24  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  27.96 
 
 
239 aa  113  3e-24  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  30.99 
 
 
246 aa  112  4.0000000000000004e-24  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  30.99 
 
 
229 aa  112  5e-24  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  30.56 
 
 
230 aa  112  5e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  28.71 
 
 
231 aa  112  6e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  33.02 
 
 
220 aa  112  6e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  33.18 
 
 
222 aa  112  7.000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  33.94 
 
 
224 aa  111  8.000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  29.95 
 
 
225 aa  111  8.000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  30.08 
 
 
254 aa  111  1.0000000000000001e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  31.25 
 
 
232 aa  111  1.0000000000000001e-23  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  30.08 
 
 
254 aa  111  1.0000000000000001e-23  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  31.63 
 
 
225 aa  110  2.0000000000000002e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  29.95 
 
 
225 aa  110  2.0000000000000002e-23  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  27.57 
 
 
225 aa  109  4.0000000000000004e-23  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  31.63 
 
 
225 aa  109  4.0000000000000004e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  27.44 
 
 
233 aa  109  4.0000000000000004e-23  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  29.33 
 
 
227 aa  108  6e-23  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  29.63 
 
 
225 aa  108  6e-23  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  33.49 
 
 
223 aa  108  7.000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  30.81 
 
 
225 aa  108  9.000000000000001e-23  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  28.14 
 
 
231 aa  107  1e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  28.14 
 
 
231 aa  107  1e-22  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  30.74 
 
 
256 aa  108  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  29.55 
 
 
239 aa  107  1e-22  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  33.8 
 
 
225 aa  107  2e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  34.09 
 
 
218 aa  107  2e-22  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  28.25 
 
 
224 aa  106  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  30.04 
 
 
252 aa  107  2e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  30.19 
 
 
225 aa  106  3e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  32.3 
 
 
241 aa  105  4e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  33 
 
 
225 aa  106  4e-22  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  33 
 
 
225 aa  106  4e-22  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.22 
 
 
228 aa  105  6e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  32.86 
 
 
225 aa  105  7e-22  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  30.19 
 
 
229 aa  105  7e-22  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_008699  Noca_1619  cyclic nucleotide-binding  33.49 
 
 
235 aa  105  8e-22  Nocardioides sp. JS614  Bacteria  normal  0.146026  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  28.99 
 
 
220 aa  105  9e-22  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  31.92 
 
 
263 aa  104  1e-21  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_013132  Cpin_4234  transcriptional regulator, Crp/Fnr family  29.03 
 
 
248 aa  104  1e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  31.46 
 
 
246 aa  104  1e-21  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  30.05 
 
 
222 aa  103  2e-21  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
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