Gene Noca_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0339 
Symbol 
ID4597976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp361275 
End bp361952 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID639774954 
Productcyclic nucleotide-binding 
Protein accessionYP_921570 
Protein GI119714605 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAACG ACGTACTCCG TCAGGCGCCG CTCTTCAGCG CGCTCGACGA CGAGGCCGCC 
ACCGCGCTGC GCGCGTCGAT GACGGAGAGC AAGCTGCGCC GCGGCGACGT GCTGTTCCAC
GAGGGCGACT CGGGCGACAA GCTCTACATC GTGCTCGACG GCAAGGTGAA GCTCGGCCGC
ACCTCCTCCG ACGGCCGCGA GAACCTCCTG GCGATCCTCG GCCCCGGCCA GATGTTCGGC
GAGCTCTCGC TCTTCGACCC TGGCCCGCGC TCGGCCACCG TCACCGCCGT CACCGACGCG
ACCTTCGCGT CGCTGTCCCA CGAGGACCTG CTGCGCTGGC TCGAGGGGCG CCCGGTGGTG
GCCCGTGGCC TGCTCACCCA GCTCGCCGGC CGGCTGCGCA AGGCCAACGA CGTGGTCGCC
GACCTGGTGT TCTCCGACGT CCCCGGCCGG GTCGCCAAGG CGCTGCTCGA CCTCGCCGAC
CGGTTCGGCC GCAGTGCCGA CGACGGCGTC CACGTCCACC ACGACCTCAC CCAGGAGGAG
CTGGCCCAGC TGGTCGGCGC CTCGCGTGAG ACCGTCAACA AGGCGCTCGC CGACTTCGCC
TCCCGCGGCT GGCTGCGCCT CGAGCCCCGC TCGGTCGTGA TCATGGACGT CGAGCGCCTG
GGCCGCCGCG CCCGGTAG
 
Protein sequence
MDNDVLRQAP LFSALDDEAA TALRASMTES KLRRGDVLFH EGDSGDKLYI VLDGKVKLGR 
TSSDGRENLL AILGPGQMFG ELSLFDPGPR SATVTAVTDA TFASLSHEDL LRWLEGRPVV
ARGLLTQLAG RLRKANDVVA DLVFSDVPGR VAKALLDLAD RFGRSADDGV HVHHDLTQEE
LAQLVGASRE TVNKALADFA SRGWLRLEPR SVVIMDVERL GRRAR