| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1294 |
|---|
| Symbol | |
|---|
| ID | 3568753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1403988 |
|---|
| End bp | 1404650 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637679757 |
|---|
| Product | cyclic nucleotide-binding: regulatory protein, Crp |
|---|
| Protein accession | YP_284516 |
|---|
| Protein GI | 71906929 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 0.957461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.413121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA CCCCTTGCGG TTTAAGTCTG GTGGTTTTGC GCAACGTACC GTTGTTTTCC
GGGCTGGACG ACGTCGAACT GGAGAAACTC TCCAAGGTCT CCGGACGAAA GCGTGTCGAA
CGTGGCGCAT CCGTGGTCAG GGCCGGCGAC AGCACGGATT CCCTGTACAT CCTGCTCAGC
GGGCGGGCGA AGGTCACCAA TACCGATGAA GATGGTCGCG AAATCATTCT CGCCTGGCTT
GGCCCGAGCG AGTTTTTTGG CGAGATGGGC CTGATTGACG GCAGTCCGCG CTCAGCCAAC
GTGGTTGCGG CCGAGCCATG CGAGTTGCTG TTTCTTAGCA AGGAATCCTT GCAGCGCTGC
CTGCAGGACA ATTTTCAGGT GACGCAGAAG TTGATGAAGA CGCTGGTGCT GCGTTTGCGC
GAGGCGGATC GCAAGATCGA GAGCCTGGCG TTGCTGGATG TTTATGGCCG GGTTGCCCGT
CTTCTGCTAG ATATGTCGGA AGTCGTTGAT GGGCGACGTA TCATCAAGAA AAAAATGTCG
AAGCAGGATA TGGCGAAAAT GATTGGCGCA TCGCGCGAAA TGGTCAGCAA GGTCATGCGC
GACCTGGAGT TGAGCGGCTA CATCCGTATC GAGAATGACC TGACGGTCAT CCCGGGGGCG
TGA
|
|---|
| Protein sequence | MATTPCGLSL VVLRNVPLFS GLDDVELEKL SKVSGRKRVE RGASVVRAGD STDSLYILLS
GRAKVTNTDE DGREIILAWL GPSEFFGEMG LIDGSPRSAN VVAAEPCELL FLSKESLQRC
LQDNFQVTQK LMKTLVLRLR EADRKIESLA LLDVYGRVAR LLLDMSEVVD GRRIIKKKMS
KQDMAKMIGA SREMVSKVMR DLELSGYIRI ENDLTVIPGA
|
|---|
| |