Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1643 |
Symbol | |
ID | 8419474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1893488 |
End bp | 1894171 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645038217 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003198505 |
Protein GI | 258405763 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGG TGGACAGGTT GCGCGAGATC GCTTTTTTCC AGGACCTTGA TGCAAACCAG CTGGCCCTGC TGGCTCGCGA GGCCAGGGTC AAGGTCTTCA GGCCGGGGGA GATCATCGTC AGTCAGGAGG AGCCGGTCCG CGCCTTCTAT CTCGTGCTTT CCGGACAGGT GAAAATCTAC CGCAGTTCTG CGGAGGGCAA GGAGCAGACC TTGTATCTGT TCGGCCCGGG GGAGCCGTTT TGTCTGTGCG CGGCTTTTGA AGAGCAGGGA TATCCAGCCA ATGCCGCGGC ATTGGAATCC AGCGAGATTG TGATTCTGCC GGGACGGACC TTTGAAAATC TGGCCCGGGA AGCGCCGTCG CTGATTTTTC CTATGCTTCT GGTCCTTTCA CGGCGGCTCA AGGAATCCAT GCAATTGGTG GAAACCCTGT CGCTCAAAGA ACTGCCGCAA CGGGTGGCGA CGTTTTTGCT CCATGCCGCG CCACGGGTGG CTGACGGGGA GACCCTGGAT ATCCGATTGC CCCTGACCCA TCGGGAACTG GCCAAAATGC TCGGAGCTAC CCCTGAAGGA CTCTCCCGGG TCTTCAAGCG GTTGCAGAAT CGGGGGCTTG TTTCGGTCAA CGGCCGGGCC ATCCGGGTCC ATGACCGGGC GGGGTTGGAA CGTTTGAGCC ACGGAGTGGA GTGA
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Protein sequence | MQTVDRLREI AFFQDLDANQ LALLAREARV KVFRPGEIIV SQEEPVRAFY LVLSGQVKIY RSSAEGKEQT LYLFGPGEPF CLCAAFEEQG YPANAAALES SEIVILPGRT FENLAREAPS LIFPMLLVLS RRLKESMQLV ETLSLKELPQ RVATFLLHAA PRVADGETLD IRLPLTHREL AKMLGATPEG LSRVFKRLQN RGLVSVNGRA IRVHDRAGLE RLSHGVE
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