Gene Dret_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1643 
Symbol 
ID8419474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1893488 
End bp1894171 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID645038217 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003198505 
Protein GI258405763 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGG TGGACAGGTT GCGCGAGATC GCTTTTTTCC AGGACCTTGA TGCAAACCAG 
CTGGCCCTGC TGGCTCGCGA GGCCAGGGTC AAGGTCTTCA GGCCGGGGGA GATCATCGTC
AGTCAGGAGG AGCCGGTCCG CGCCTTCTAT CTCGTGCTTT CCGGACAGGT GAAAATCTAC
CGCAGTTCTG CGGAGGGCAA GGAGCAGACC TTGTATCTGT TCGGCCCGGG GGAGCCGTTT
TGTCTGTGCG CGGCTTTTGA AGAGCAGGGA TATCCAGCCA ATGCCGCGGC ATTGGAATCC
AGCGAGATTG TGATTCTGCC GGGACGGACC TTTGAAAATC TGGCCCGGGA AGCGCCGTCG
CTGATTTTTC CTATGCTTCT GGTCCTTTCA CGGCGGCTCA AGGAATCCAT GCAATTGGTG
GAAACCCTGT CGCTCAAAGA ACTGCCGCAA CGGGTGGCGA CGTTTTTGCT CCATGCCGCG
CCACGGGTGG CTGACGGGGA GACCCTGGAT ATCCGATTGC CCCTGACCCA TCGGGAACTG
GCCAAAATGC TCGGAGCTAC CCCTGAAGGA CTCTCCCGGG TCTTCAAGCG GTTGCAGAAT
CGGGGGCTTG TTTCGGTCAA CGGCCGGGCC ATCCGGGTCC ATGACCGGGC GGGGTTGGAA
CGTTTGAGCC ACGGAGTGGA GTGA
 
Protein sequence
MQTVDRLREI AFFQDLDANQ LALLAREARV KVFRPGEIIV SQEEPVRAFY LVLSGQVKIY 
RSSAEGKEQT LYLFGPGEPF CLCAAFEEQG YPANAAALES SEIVILPGRT FENLAREAPS
LIFPMLLVLS RRLKESMQLV ETLSLKELPQ RVATFLLHAA PRVADGETLD IRLPLTHREL
AKMLGATPEG LSRVFKRLQN RGLVSVNGRA IRVHDRAGLE RLSHGVE