Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2102 |
Symbol | |
ID | 5694945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2553966 |
End bp | 2554646 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641264703 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_001529983 |
Protein GI | 158522113 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000889631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCCG CCACTGTTAT TGCCGAGGCC CCTCTGTTTG CCGGCCTTCC TGCCGACCAG CTCGAAAAAG TGGCCAGAAT CGCCCAGTCA AAACCCTTTG AAAAGGGGGA GATGATATTT TCCGATGGCC AGAAAGCCGA CGGATTTTAC GTGGTGGCGC AAGGTCGCAT CAAGGTGTTC AAGGTCTCCC TGGACGGCAA AGAGCAGATT CTTCATATTT TCGGCCCGGG TGAGCCCGTG GGCGAGGTGC CGGTTTTTGC CGGCAGCGCC TTTCCGGCCG GGGCCGCAGC CCTTGAAAAG AGCCTGCTGC TGTTTTTTCC AAAAACCGTC TTTGTCCGGC TCCTGGAAGA AAACACCCCC CTGGTGCTTA ACATGCTGGC CGTTCTCTCC CGGCGGCTGA GACAGTTTAC CGTGCAGGTG GAAAACCTTT CGTTAAAAGA GGTACCCGGC CGCCTGGCCG GGTACCTGCT GTTTCTGGCA AAGGAGCAGA AGGATACCCG GCGCGTGGAG CTGTCCATTT CCAAGGGCCA GCTGGCCAGC CTGCTGGGCA CGATTCCGGA AACCCTTTCC CGCATTCTTG CAAAGATGCG GGATACCGGC CTGATCGAGG TGGAGGGCGC CGTTATTTCG CTTCTGGACA TCGAGGGCCT GGAGCTGCTG GCAGCGGACG GCCGCCTGTA A
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Protein sequence | MDPATVIAEA PLFAGLPADQ LEKVARIAQS KPFEKGEMIF SDGQKADGFY VVAQGRIKVF KVSLDGKEQI LHIFGPGEPV GEVPVFAGSA FPAGAAALEK SLLLFFPKTV FVRLLEENTP LVLNMLAVLS RRLRQFTVQV ENLSLKEVPG RLAGYLLFLA KEQKDTRRVE LSISKGQLAS LLGTIPETLS RILAKMRDTG LIEVEGAVIS LLDIEGLELL AADGRL
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