Gene Dole_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2102 
Symbol 
ID5694945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2553966 
End bp2554646 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content59% 
IMG OID641264703 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001529983 
Protein GI158522113 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000889631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCCG CCACTGTTAT TGCCGAGGCC CCTCTGTTTG CCGGCCTTCC TGCCGACCAG 
CTCGAAAAAG TGGCCAGAAT CGCCCAGTCA AAACCCTTTG AAAAGGGGGA GATGATATTT
TCCGATGGCC AGAAAGCCGA CGGATTTTAC GTGGTGGCGC AAGGTCGCAT CAAGGTGTTC
AAGGTCTCCC TGGACGGCAA AGAGCAGATT CTTCATATTT TCGGCCCGGG TGAGCCCGTG
GGCGAGGTGC CGGTTTTTGC CGGCAGCGCC TTTCCGGCCG GGGCCGCAGC CCTTGAAAAG
AGCCTGCTGC TGTTTTTTCC AAAAACCGTC TTTGTCCGGC TCCTGGAAGA AAACACCCCC
CTGGTGCTTA ACATGCTGGC CGTTCTCTCC CGGCGGCTGA GACAGTTTAC CGTGCAGGTG
GAAAACCTTT CGTTAAAAGA GGTACCCGGC CGCCTGGCCG GGTACCTGCT GTTTCTGGCA
AAGGAGCAGA AGGATACCCG GCGCGTGGAG CTGTCCATTT CCAAGGGCCA GCTGGCCAGC
CTGCTGGGCA CGATTCCGGA AACCCTTTCC CGCATTCTTG CAAAGATGCG GGATACCGGC
CTGATCGAGG TGGAGGGCGC CGTTATTTCG CTTCTGGACA TCGAGGGCCT GGAGCTGCTG
GCAGCGGACG GCCGCCTGTA A
 
Protein sequence
MDPATVIAEA PLFAGLPADQ LEKVARIAQS KPFEKGEMIF SDGQKADGFY VVAQGRIKVF 
KVSLDGKEQI LHIFGPGEPV GEVPVFAGSA FPAGAAALEK SLLLFFPKTV FVRLLEENTP
LVLNMLAVLS RRLRQFTVQV ENLSLKEVPG RLAGYLLFLA KEQKDTRRVE LSISKGQLAS
LLGTIPETLS RILAKMRDTG LIEVEGAVIS LLDIEGLELL AADGRL