Gene Sfum_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3445 
Symbol 
ID4458250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4207826 
End bp4208512 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID639704217 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_847551 
Protein GI116750864 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.90711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000836213 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGGAAACAC GGGCGTCGAT TGCACAAGTC CCCTTGTTTG AAGGCCTGCC GGCCGATCAA 
CTGAGCAAGG TCGCGGATGT TTCCATCGAA CAGAAGTTCG GCAAGGGACA GACGCTCTTT
TCGGAAGGGG CGAAAGCCAC GGGCTTCTAT GTGATCGTGT CCGGGAGGAT CAAGATCTAC
AAGCTGTCCC TCGAGGGCAA GGAACAGATC CTGCACATTT TCGGGGCGGG CGAGTTCTTT
GCCGAAGTCC CCGTGTTCGC GGGAGGCGCC TTCCCGGCCC ACGCGGAAGC GATCGAGGCG
AGCCGCGTGC TGTTCTTTCC CCGCGCGGCC TTCATCGAGC TGGTGCGCAG CGAGCCTTCG
CTGGCCCTCA ACATGCTGGC GATCCTGTGT CAACGGTTGC GACGCTTCAC GCACATGGTC
GAAGACCTGT CGCTCAAGGA AGTCCCCGGA AGGCTGGCGG CCTACCTGCT CTACCTCGGG
GAGCGCGCGG AAGGATCGGA CCGGCTCGAG CTCGACACCA CCAAGGGCCA GCTGGCAAGC
CTTTTGGGAA CGATCCCCGA AACCCTCTCG CGGATCCTGG CAAAGATGAG CCAGCAGGAA
TTCATCACGG TCGAAGGGCG CAGGATCACG ATCCTCAACC GCGAGGCGCT CGAAAACCTG
GCCGCCGGGG AAAAACTGCC GGGGTGA
 
Protein sequence
METRASIAQV PLFEGLPADQ LSKVADVSIE QKFGKGQTLF SEGAKATGFY VIVSGRIKIY 
KLSLEGKEQI LHIFGAGEFF AEVPVFAGGA FPAHAEAIEA SRVLFFPRAA FIELVRSEPS
LALNMLAILC QRLRRFTHMV EDLSLKEVPG RLAAYLLYLG ERAEGSDRLE LDTTKGQLAS
LLGTIPETLS RILAKMSQQE FITVEGRRIT ILNREALENL AAGEKLPG