More than 300 homologs were found in PanDaTox collection
for query gene Dred_0698 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  100 
 
 
227 aa  459  9.999999999999999e-129  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  60 
 
 
226 aa  280  1e-74  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  57.96 
 
 
226 aa  269  2e-71  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  52.75 
 
 
225 aa  243  1.9999999999999999e-63  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  43.64 
 
 
225 aa  204  9e-52  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  41.74 
 
 
243 aa  186  3e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  36.82 
 
 
229 aa  164  1.0000000000000001e-39  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  35.91 
 
 
226 aa  152  5e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  37.26 
 
 
220 aa  150  2e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  35.91 
 
 
224 aa  147  1.0000000000000001e-34  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  36.12 
 
 
228 aa  147  1.0000000000000001e-34  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  35.24 
 
 
224 aa  145  6e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  36.53 
 
 
248 aa  144  1e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  34.43 
 
 
225 aa  143  2e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  34.56 
 
 
228 aa  143  2e-33  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  34.91 
 
 
226 aa  140  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  33.65 
 
 
225 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  33.49 
 
 
225 aa  139  3e-32  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  33.95 
 
 
226 aa  139  3e-32  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  33.64 
 
 
225 aa  139  3e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  34.56 
 
 
225 aa  139  3.9999999999999997e-32  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  31.16 
 
 
249 aa  138  6e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  33.18 
 
 
225 aa  138  7.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  35.44 
 
 
231 aa  138  8.999999999999999e-32  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  35.68 
 
 
219 aa  137  1e-31  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  35.1 
 
 
228 aa  137  2e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.09 
 
 
225 aa  136  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  33.49 
 
 
228 aa  136  3.0000000000000003e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  33.02 
 
 
225 aa  135  6.0000000000000005e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  31.98 
 
 
228 aa  134  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  33.02 
 
 
225 aa  133  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  35.82 
 
 
230 aa  133  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  35.32 
 
 
230 aa  134  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  35.32 
 
 
230 aa  133  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  35.32 
 
 
230 aa  132  3e-30  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  35.32 
 
 
230 aa  132  3e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  35.32 
 
 
230 aa  132  3e-30  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  32.59 
 
 
226 aa  133  3e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  35.32 
 
 
230 aa  132  3e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  35.32 
 
 
226 aa  132  3.9999999999999996e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  31.08 
 
 
231 aa  131  6.999999999999999e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  34.83 
 
 
230 aa  131  6.999999999999999e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  32.44 
 
 
231 aa  130  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  35.35 
 
 
230 aa  130  2.0000000000000002e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  30.7 
 
 
224 aa  130  2.0000000000000002e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  34.43 
 
 
225 aa  130  2.0000000000000002e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  35.78 
 
 
251 aa  130  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  33.02 
 
 
226 aa  130  2.0000000000000002e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  30.22 
 
 
236 aa  129  3e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  33.33 
 
 
227 aa  129  3e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  32.39 
 
 
229 aa  129  3e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  35.59 
 
 
239 aa  128  8.000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  33.18 
 
 
247 aa  127  1.0000000000000001e-28  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  31.63 
 
 
242 aa  127  1.0000000000000001e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  29.95 
 
 
230 aa  126  2.0000000000000002e-28  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  33.33 
 
 
234 aa  127  2.0000000000000002e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  32.88 
 
 
226 aa  127  2.0000000000000002e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  35.11 
 
 
228 aa  126  2.0000000000000002e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  33.99 
 
 
236 aa  127  2.0000000000000002e-28  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  32.57 
 
 
227 aa  126  3e-28  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  30.09 
 
 
241 aa  125  4.0000000000000003e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  33.18 
 
 
235 aa  125  4.0000000000000003e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  30.41 
 
 
239 aa  125  5e-28  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  31.16 
 
 
227 aa  125  5e-28  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  31.51 
 
 
225 aa  124  8.000000000000001e-28  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  31.16 
 
 
227 aa  125  8.000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  30.09 
 
 
230 aa  124  1e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  33.33 
 
 
229 aa  124  1e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  28.64 
 
 
229 aa  122  6e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  30.53 
 
 
229 aa  120  9.999999999999999e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  27.8 
 
 
232 aa  121  9.999999999999999e-27  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  29.41 
 
 
226 aa  120  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  27.32 
 
 
232 aa  119  3.9999999999999996e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  31.96 
 
 
225 aa  119  4.9999999999999996e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  30.66 
 
 
261 aa  118  6e-26  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  29.82 
 
 
243 aa  118  7e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  29.02 
 
 
235 aa  117  9.999999999999999e-26  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  25.58 
 
 
231 aa  117  9.999999999999999e-26  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  31.63 
 
 
224 aa  116  1.9999999999999998e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  27.01 
 
 
231 aa  116  3e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  30.18 
 
 
230 aa  116  3e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.57 
 
 
254 aa  114  8.999999999999998e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  26.15 
 
 
231 aa  114  1.0000000000000001e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  26.15 
 
 
231 aa  114  1.0000000000000001e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  25.23 
 
 
231 aa  113  2.0000000000000002e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  28.3 
 
 
233 aa  113  3e-24  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  32.56 
 
 
224 aa  112  4.0000000000000004e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  30.7 
 
 
224 aa  112  4.0000000000000004e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  30 
 
 
229 aa  112  4.0000000000000004e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  32.11 
 
 
223 aa  112  5e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  30.93 
 
 
352 aa  111  9e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  30.26 
 
 
238 aa  111  9e-24  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  28.57 
 
 
236 aa  110  1.0000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  31.22 
 
 
263 aa  110  1.0000000000000001e-23  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  26.89 
 
 
240 aa  111  1.0000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  26.46 
 
 
236 aa  110  1.0000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  27.93 
 
 
243 aa  110  2.0000000000000002e-23  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  29.77 
 
 
224 aa  110  2.0000000000000002e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  30.23 
 
 
224 aa  110  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  30.7 
 
 
246 aa  109  3e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
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