Gene Nham_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2812 
Symbol 
ID4030649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3099172 
End bp3099903 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID637971257 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_578043 
Protein GI92118314 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAG TTCCGCCTCT GTCCCGGCAG GTCCTTTCAA ACCTTGAGCT CTTTCGGGGC 
TTGTCGACGG CAGCGCTGGA CGACGTCGTC GCCTCCGCCA GTACGCGCGC TTTTGCTCGC
GATTTTCGTG TGTTCAACCA GGGTGAAACA CGCGTGCGCG CTCATGTCCT TATCGATGGC
TGGATCAGGA TTTCTCAATC CGGCAGCGAT GGAGCGCAGA TCGTCGTGCG CTTCATCGGA
CCGGGCGACA TTTTCGGTGC AATTTCCTTG TTCACGGATC GGCGCTATCC TGCCGATGCC
GACACCCTGA CGGATGCAAC CGAGGTGAGC TGGAGCGACA GAGCTTTGCT CGACCTGATG
AACAACCATC CGCAGATCGC CATCAATGCC GTTCGCATCG TCGGCCAACG GCTTCAAGAG
GCACAGCATC GGGTTCGCGA ACTGGCCACC CAGCGCGCGG AGCGGCGCGT GGCTCATGCG
TTATTGCGAC TGCTTCGTCA GGTGGGCACC ACGACCTCCC GAGGCATCGT CATCCGCTTT
CCGCTTCGTC GGAAAGACAT TGCCGATATC GCCGGAACGA CGCTTTATTC CGCGAGCCGC
ATTCTGAGTG CCTGGGAAAG AGCCGGCTGG CTAAAGACGC TCGACCGGCG CATTGTGGTC
CAAAGTCTCT CGGACCTGAT GCGGATCGCA GAGGATGAGA GCGGACAGGA CATCACGCCA
TTACCGCCGT GA
 
Protein sequence
MSKVPPLSRQ VLSNLELFRG LSTAALDDVV ASASTRAFAR DFRVFNQGET RVRAHVLIDG 
WIRISQSGSD GAQIVVRFIG PGDIFGAISL FTDRRYPADA DTLTDATEVS WSDRALLDLM
NNHPQIAINA VRIVGQRLQE AQHRVRELAT QRAERRVAHA LLRLLRQVGT TTSRGIVIRF
PLRRKDIADI AGTTLYSASR ILSAWERAGW LKTLDRRIVV QSLSDLMRIA EDESGQDITP
LPP