Gene Dhaf_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3071 
Symbol 
ID7260082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3288177 
End bp3288851 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content51% 
IMG OID643562991 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002459530 
Protein GI219669095 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00222127 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTGACC CGCGAATTCT CAGGCAGTTT ACTTTGTTTT CATCTCTGGC GGACGAGGAT 
TTGCTTCCGC TGCTGCCTCA ATTTAAAACC CGCAAATACA GAAAAGGCCA GATCCTTTTT
ATTGAAGGGG AGATCGGCTC CCAGGTTTAC TTTATCTTAG AAGGCCAGGT CAAGCTCAGC
AAGACCTTGC CCAATGGGGA TGAACAAATC CTCGATTGGT GCGGCCCCAA GGACAGCCTT
GCCGAAATTC TCTTGGTGGA ACCGGGTTCT TATCCGGCCA CGGCGGAAGT ACTTAAAGAA
AGCACCCTCC TGGTGCTTTC CAATCAGGGC ATGGTTAAGA TTCTCGAAAA TCACCCCCGC
CTGGCCGTTG CTCTCATTCG CAAGCTCAAT ATGCGTTTGC GGATGAATCA AGAGTTTATT
CGGATCTTAA CCAGTCGGTC CACGGCGGGC ATTTTGGCTA TGCTGCTGCT GCGAATGGCT
AAGCCGGCCT CATCACCCGG TGAGCCTATT TACTACGATG CCACCCTGAC CAATAAGGAC
TTAGCCAGTA TGATCGGTAC TTCACGGGAA CTGGTCAACC GCACCCTCAA TCAGTGGAAA
AAATCAGGCG TCCTTTGTCT TAATGAAGAT CGCATGGAAA TCCTTCGCCC CCACGAACTA
GCGGACTGGC CATGA
 
Protein sequence
MLDPRILRQF TLFSSLADED LLPLLPQFKT RKYRKGQILF IEGEIGSQVY FILEGQVKLS 
KTLPNGDEQI LDWCGPKDSL AEILLVEPGS YPATAEVLKE STLLVLSNQG MVKILENHPR
LAVALIRKLN MRLRMNQEFI RILTSRSTAG ILAMLLLRMA KPASSPGEPI YYDATLTNKD
LASMIGTSRE LVNRTLNQWK KSGVLCLNED RMEILRPHEL ADWP