Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3945 |
Symbol | |
ID | 3969232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4395780 |
End bp | 4396502 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637927049 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_533790 |
Protein GI | 90425420 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000374248 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGG TCGACAGTTC ACTGGTGGCG GATCTGCCGC TGTTTGCCGG GCTCGCGGCT GCCGAACTCG ACGCCGTGCT GACCGACGCG CGTTCGGCGC GCGTCGCCAA GAACGCCGCG GTGTTTCGTC AGGGCGACGA GGCGCAATCG TTCTACGTGC TGCTGCACGG TCACGTCCGC GCCAGCAAGA CCACGGCGGG CGGCGAGCAG GTGGTGGTGC GTTACGTCAG CCCCGGCGAA ACTTTTGGCG TGGCGATGGC GATCGGGTTG CAGCGCTATC CGGCGACCGC GACCGCGGTC GAGGAATCCG TCGTGCTGGC CTGGCCGGCG GCGAGCTGGC CGCGCCTCGT CGAGCGCTTT CCGCAGCTCG CCACCAACAC CTTGCGCAGC GTCGGCAGCC GGCTGCAGGA GACCCACACC CGGGTGGTCG AGATGTCGAC CCAACAGGTC GAGCAGCGCA TCGCGCACGC GCTGTTGCGG CTCGCCAAGC AGGCCGGCCG CAAGGTGGAG AACGGCGTCG AGATCGCGTT CCCGATCAGC CGGCAGGACA TCGCGCAGAT GACCGGCTCG ACGCTGCATA CGGTGAGCCG GCTGCTCTCC AGCTGGGAAA GCCGCGGCCT GATCGAGAGC GGCCGGCAGC GCATCGTGTT GCGCGATCCG CACGGCTTGG TGCTGCTGTC CGAGCAGGTT CCGGGCGACA TCGAGCCGGC GAAGAAAATC TAG
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Protein sequence | MPTVDSSLVA DLPLFAGLAA AELDAVLTDA RSARVAKNAA VFRQGDEAQS FYVLLHGHVR ASKTTAGGEQ VVVRYVSPGE TFGVAMAIGL QRYPATATAV EESVVLAWPA ASWPRLVERF PQLATNTLRS VGSRLQETHT RVVEMSTQQV EQRIAHALLR LAKQAGRKVE NGVEIAFPIS RQDIAQMTGS TLHTVSRLLS SWESRGLIES GRQRIVLRDP HGLVLLSEQV PGDIEPAKKI
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