More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_0106 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  100 
 
 
254 aa  507  1e-143  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  35.75 
 
 
225 aa  134  9.999999999999999e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  32.73 
 
 
225 aa  129  5.0000000000000004e-29  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  31.6 
 
 
235 aa  122  4e-27  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  32.57 
 
 
243 aa  122  5e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  32.5 
 
 
236 aa  120  1.9999999999999998e-26  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  32.5 
 
 
236 aa  119  6e-26  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  29.68 
 
 
226 aa  117  1.9999999999999998e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  27.57 
 
 
227 aa  114  1.0000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  33.8 
 
 
222 aa  114  1.0000000000000001e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  34.85 
 
 
225 aa  114  1.0000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  33.18 
 
 
231 aa  113  2.0000000000000002e-24  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  34.85 
 
 
225 aa  114  2.0000000000000002e-24  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  28.64 
 
 
226 aa  113  4.0000000000000004e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  30.05 
 
 
227 aa  112  6e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  36.41 
 
 
225 aa  112  8.000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  33.33 
 
 
229 aa  112  8.000000000000001e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  29.25 
 
 
239 aa  110  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  33.49 
 
 
225 aa  109  4.0000000000000004e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  33.33 
 
 
242 aa  109  5e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  34.43 
 
 
224 aa  108  9.000000000000001e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  26.75 
 
 
267 aa  107  1e-22  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  31.28 
 
 
246 aa  107  2e-22  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.92 
 
 
224 aa  107  2e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.27 
 
 
219 aa  106  3e-22  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  30.77 
 
 
232 aa  106  3e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  29.82 
 
 
225 aa  106  4e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  30.09 
 
 
236 aa  106  4e-22  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  31.6 
 
 
225 aa  106  4e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  31.28 
 
 
263 aa  105  6e-22  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  26.42 
 
 
226 aa  105  6e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  30.09 
 
 
236 aa  105  8e-22  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  31.84 
 
 
224 aa  105  1e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  32.85 
 
 
240 aa  103  2e-21  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  30.59 
 
 
231 aa  104  2e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  32.35 
 
 
249 aa  102  4e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  29.32 
 
 
223 aa  102  6e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.32 
 
 
225 aa  102  7e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  32.35 
 
 
352 aa  102  8e-21  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  33.88 
 
 
228 aa  101  1e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  30.09 
 
 
251 aa  101  1e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  32.6 
 
 
232 aa  101  1e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  33.84 
 
 
224 aa  100  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  32.52 
 
 
236 aa  100  2e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  32.34 
 
 
250 aa  100  2e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  31.84 
 
 
230 aa  100  2e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  31.13 
 
 
226 aa  100  3e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  32.84 
 
 
261 aa  99.8  4e-20  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  35.5 
 
 
226 aa  99.8  4e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  31.55 
 
 
225 aa  99.4  4e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  31.82 
 
 
225 aa  99.4  4e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  28.27 
 
 
234 aa  99.8  4e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  29.44 
 
 
222 aa  99  6e-20  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  30.66 
 
 
226 aa  99  7e-20  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  29.57 
 
 
240 aa  99  7e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0631  cyclic nucleotide-binding protein  35.29 
 
 
235 aa  99  7e-20  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0164371 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  31.51 
 
 
231 aa  98.6  8e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  29.13 
 
 
230 aa  98.6  8e-20  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  31.61 
 
 
247 aa  98.2  1e-19  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  29.11 
 
 
235 aa  97.8  1e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  31.36 
 
 
226 aa  98.2  1e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  31.46 
 
 
229 aa  97.8  1e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  34.78 
 
 
225 aa  98.2  1e-19  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  32.7 
 
 
236 aa  98.2  1e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  30.11 
 
 
223 aa  97.4  2e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  31.78 
 
 
223 aa  97.1  2e-19  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  33.84 
 
 
224 aa  97.8  2e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  32.2 
 
 
236 aa  96.7  3e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.91 
 
 
220 aa  96.7  3e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  28.51 
 
 
229 aa  96.7  3e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  31.31 
 
 
223 aa  97.1  3e-19  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  28.1 
 
 
229 aa  96.3  4e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  32.32 
 
 
224 aa  96.3  4e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  27.68 
 
 
229 aa  95.9  5e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  32.2 
 
 
257 aa  95.9  6e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  32.04 
 
 
236 aa  95.9  6e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  29.27 
 
 
231 aa  95.5  7e-19  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  27.83 
 
 
217 aa  95.1  9e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  29.41 
 
 
225 aa  95.1  1e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  28.43 
 
 
234 aa  94.7  1e-18  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  29.41 
 
 
225 aa  95.1  1e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  29.9 
 
 
227 aa  94.7  1e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  31.1 
 
 
228 aa  95.1  1e-18  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  34.43 
 
 
226 aa  94.7  1e-18  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  27.8 
 
 
231 aa  94.4  2e-18  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  29.8 
 
 
230 aa  94  2e-18  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  31.66 
 
 
228 aa  94.4  2e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  27.8 
 
 
231 aa  94.4  2e-18  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  30.35 
 
 
229 aa  93.6  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  26.79 
 
 
231 aa  93.2  4e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  30.63 
 
 
250 aa  92.8  5e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  29.5 
 
 
238 aa  92.4  5e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  29 
 
 
241 aa  92.4  6e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  28.34 
 
 
223 aa  92.4  7e-18  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  26.37 
 
 
210 aa  92.4  7e-18  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  29.85 
 
 
248 aa  92  8e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  30.84 
 
 
226 aa  92  8e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  28 
 
 
227 aa  91.7  9e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  30.84 
 
 
224 aa  91.7  9e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  31.31 
 
 
224 aa  92  9e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
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