Gene Rpal_4621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4621 
Symbol 
ID6412307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4981634 
End bp4982344 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID642714500 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001993587 
Protein GI192292982 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGA TCGACACTTC CATGGTTGCG AAACTGCCGC TGTTTGCCGG GCTGAGCCGG 
GCAGAGCTCG ACGCCGTGCT GAAGGAAGCG CAGTCGATCC GGGTTCCCAA GAACGGCCAT
GTGTTCGAAC AGGGAGAGGA CGCCCATTCG TTCTTCGTGC TGTTGCACGG CCACGTTCGC
GCCAGCAAAG TGACGCCGGC CGGCGAGCAG ATCGTGGTGC GCTACGTCGC GCCCGGCGAG
ACGCTCGGCG TGGCGATGGC GATAGGCCTC AACCGCTATC CGGCGACCGC CACCGCGGTC
GACGATTCGA TCGTGCTGGC CTGGCCGACC GCGGCCTGGC CGCGGCTGGT CGAGCAGTAT
CCGGCGCTTG CCACCAACAC GCTGCGCACC GTCGGCGGCC GGCTGCAGGA GACGCATTCC
CGGGTGGTGG AGATGTCGAC CCAGCAGGTC GAGCAGCGCG TCGCCCATGC GCTGCTGCGG
CTCGCCAAGC AGAGCGGCCG CAAGGTCGAG AACGGCGTGC AGATCGATTT CCCGATCAGC
CGGCAGGACA TCGCGCAGAT GACCGGCACC ACCCTGCACA CCGTCAGCCG GCTGTTGTCG
GGCTGGGAGC AGAAGGGCCT GATCGAAAGC GGCCGGCAGA AGATCGTACT GCGCGAGCCG
CATCAGCTCG TGGTGCTGGC CGATCAGGCG CCCGACGACA AGACCTCCTG A
 
Protein sequence
MATIDTSMVA KLPLFAGLSR AELDAVLKEA QSIRVPKNGH VFEQGEDAHS FFVLLHGHVR 
ASKVTPAGEQ IVVRYVAPGE TLGVAMAIGL NRYPATATAV DDSIVLAWPT AAWPRLVEQY
PALATNTLRT VGGRLQETHS RVVEMSTQQV EQRVAHALLR LAKQSGRKVE NGVQIDFPIS
RQDIAQMTGT TLHTVSRLLS GWEQKGLIES GRQKIVLREP HQLVVLADQA PDDKTS