Gene Sare_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3499 
Symbol 
ID5704770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4038519 
End bp4039211 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID641272926 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001538292 
Protein GI159039039 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00506626 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGGTGC GCCTACCGGA GCCGGGCGAC GCGCTCACGG GCGTCGAGAT GTTCGCCGGC 
CTCGAGCCGG AGGTCCGGCA GCGGGTCATC GCGGCGGCGG TGCCGCGCAC CTACCGCAAG
GGGCAGCTGC TCTTCGTGGA GAACGACCCG GGCGAGTCAC TGATCGTGCT ACGCCGGGGC
GCGGTGGCCG TCTTCCGCAC CGCCCCCACC GGCGAGCGGG CCGTGCTGTC GGTGATCCGG
CCGCCGGATG TGCTGGGCGA GGTCTCGCTG CTGGACGCCT CCACCCGGTC GGCGTCCGCC
GAGGCCATCG AGGACTGCTC GGCCCTCGCG CTGTCCCGGG GGGCGTTCAT GGAGTTGGTG
CACTCGAACC CGCGCATCCT GGACGCGGTG ATGCGCTCCC TCGGCAGCCT GATCCGCCGG
TTGACCGAGC AGAACGCCGA CCACGTTTTC CTCGACCTGC CCGGCCGGGT GGCCAAAACG
CTGGTCCGGC TGGCCGGCGA GAGCCAAGCC CCCATGATCA CTATCGAGCT GAACCAGAGC
CAGCTCGCCG AGATGGCCGG CGGCTCCCGG CAAAGCGTCA ACCAGGCCAT CGGCTCGTTC
GCCAGCCGGG GCTGGCTACG CACCGAGGGC CGTCGGATCG TGGTCACCGA CGTGGCGTCG
CTGCGCCGCC GCGCCGGCAT GAACGAACGC TGA
 
Protein sequence
MEVRLPEPGD ALTGVEMFAG LEPEVRQRVI AAAVPRTYRK GQLLFVENDP GESLIVLRRG 
AVAVFRTAPT GERAVLSVIR PPDVLGEVSL LDASTRSASA EAIEDCSALA LSRGAFMELV
HSNPRILDAV MRSLGSLIRR LTEQNADHVF LDLPGRVAKT LVRLAGESQA PMITIELNQS
QLAEMAGGSR QSVNQAIGSF ASRGWLRTEG RRIVVTDVAS LRRRAGMNER