| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1465 |
|---|
| Symbol | |
|---|
| ID | 3908415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1654011 |
|---|
| End bp | 1654721 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883359 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_485086 |
|---|
| Protein GI | 86748590 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.342125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.439299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCA TCGACACCTC TCTCGTTGCG AAACTGCCAC TGTTCGCGGG CTGCAGTGCC
GACGAGCTCG ACGCCATCCT CAAGGAGGCC CGCTCGATCC GGGTTCCGAA GAACGGCAAC
GTGTTCGAGC AAGGCGAGGA CGCGCATTCG TTCTTCGTGC TGCTGCACGG CCATGTCCGC
GCCAGCAAGC TGACGCCGGC CGGCGAGCAG GTGGTGGTGC GCTATGTGGC GCCCGGCGAG
ACGCTGGGCG TCGCGATGGC GATCGGGCTG CCAAGCTATC CGGCGACGGC GACCGCGGTC
GACGACAGCG TGGTGCTGGC ATGGCCGACC GCGGCGTGGC CGCGCCTCGT CGAGCGCCAT
CCGGCGCTCG CCACCAACAC GCTGCGGACC GTCGGGGCCC GGTTGCAGGA AACCCATTCG
CGCGTCATTG AAATGTCGAC CCAACAGGTC GAGCAGCGCG TCGCCCGGGC ATTGCTGCGG
CTCGCCAAGC AATCCGGCCG CCCGGTCGAG ACCGGCGTCG AGATCGATTT TCCGATCAGC
CGGCAGGATA TCGCACAAAT GACGGGAACC ACACTGCACA CCGTCAGCAG ATTGCTGTCC
GGCTGGGAGA GCCGCGGCCT GATCGAGGGC GGCCGACGGC GCATCGTGCT GCGCGCGCCG
GATCAGCTCG TGGCGCTGGC GGAACAGACG CCCGACGACA CCGCGTCGTG A
|
|---|
| Protein sequence | MATIDTSLVA KLPLFAGCSA DELDAILKEA RSIRVPKNGN VFEQGEDAHS FFVLLHGHVR
ASKLTPAGEQ VVVRYVAPGE TLGVAMAIGL PSYPATATAV DDSVVLAWPT AAWPRLVERH
PALATNTLRT VGARLQETHS RVIEMSTQQV EQRVARALLR LAKQSGRPVE TGVEIDFPIS
RQDIAQMTGT TLHTVSRLLS GWESRGLIEG GRRRIVLRAP DQLVALAEQT PDDTAS
|
|---|
| |