Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_05940 |
Symbol | |
ID | 7314499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 646371 |
End bp | 647066 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643611024 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002508346 |
Protein GI | 220931438 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.558941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGA TGCAGAGACG ATGTCTTAAA GAATTGATGG TCTTTTCAAA AATGGAAAGG GATGAAGTAG CCCTGATCTG TGAAAGGGCT TATGAGAAGT GGTTTCGTAA AGGTGAAGTT ATCTTTTTTG AAAATGATGA TAACCGAAAT CTCTATGTTC TCGTATCAGG CCGGGTAAAA TTATCCATGC TTTCAGCTGA AGGGAAGGAA AAGGTATTAA CAATTCTCCA GGAAGGGGAT ATTTTTGGAG AAGTATCCCT GTTCGATCAG GACCCACTCC CGGTAACAGC GGAAGTAATT AAAGATTCTC GCTTAATTGT GTTACCTGTT AAAGACCTGG AAAATATCAT TATGAAAAAC CCCAAGGTAG CCATTAAAAT TATAGAAGCC CTGGCCAAAA AGACGCGTTT ATTAACTGGC CAGATAAGGG ATCTGGTTTT TTATGATGCT GAAGGGAGGC TTGCCAGTCT CTTATTGAGG TTTGCTAAAG ATTTCGGGAT AGATGTAAAA AGTGGGACTT TAATTGACCT GGTTTTGACC CATCAGGAAA TCGCCAATTT GCTGGGTTCT TCCCGGGTGA CAGTTACTAA ATTACTGAAT CAGTTTATTG ATGAAGGGAT TATTAAAACA TATAAGCGTA AGATTGTAAT TATGAAACCT GAACAGTTAC ATGATAAAAT GCAAAATATG ATTTAG
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Protein sequence | MEEMQRRCLK ELMVFSKMER DEVALICERA YEKWFRKGEV IFFENDDNRN LYVLVSGRVK LSMLSAEGKE KVLTILQEGD IFGEVSLFDQ DPLPVTAEVI KDSRLIVLPV KDLENIIMKN PKVAIKIIEA LAKKTRLLTG QIRDLVFYDA EGRLASLLLR FAKDFGIDVK SGTLIDLVLT HQEIANLLGS SRVTVTKLLN QFIDEGIIKT YKRKIVIMKP EQLHDKMQNM I
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