Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2492 |
Symbol | |
ID | 8253599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2890910 |
End bp | 2891968 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644936142 |
Product | response regulator receiver |
Protein accession | YP_003092758 |
Protein GI | 255532386 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.570528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0101485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAA CACGCATACT GATTATTGAA GATAATGAAG ACATCAGAGA GAGTACCGCT GAAATACTTG AACTGGCCAA TTACGAGGTT TTACAGGCCC ATAATGGAAA AGTAGGAATG GAACTGGCCG CAAAACACCT GCCAGACCTG GTGCTTTGCG ACATCATGAT GCCCGAACTG GATGGTTATG GTGTATTATA CCTCTTAAAT AAAAACCCTA AAACTGCAGC AACCCCCTTT ATTTTTTTAA CCGCAAAAGC AGAACGGATC GACATGCGCA AAGGTATGGA AATGGGAGCA GATGATTACC TGACCAAACC TTTTGACGAT GTAGAACTGC TGAACGCCAT TGAAAGCAGG CTCAGTAAAA AAGACAAACA GGAACTGTTT TACAGCCAAT CGCTCGACAA ACTCAGTACC TTGCTCGGAA GCAATTCGGG CATGGCCGAA CTCCAGAAAA TGATAGCCGA CCGCAAAGTG CGGAATGTGA AGAAAAAACA GGTGATCTAT TATGAAGGCG ACGCTGTTCA GGGTATTTAC CTGGTACTGA CCGGAAAGGT CAAAACCATT AAGCTGAGTG AGGATGGCCG TGAACTGCTT ACAGGACTCT ATAACGCAGA AGAATATTTT GGTATCCCTG CACTTTTAGG GCACGAACCT TATGCCGAAA CAGCCGAGGC CCTGGAAGAT ACCACCGTAT GCCTGTTGCC AAAAGAAATG GTAGAAGCAT TGCTGAATAA ATACCCTGAT GTGGCCAAAG AATTTATCCG CATCCTCTCC AATAACCTGC GCAGCAAGGA AGAACAACTG TTACAGCTGG CTTACCATTC CGTAAGAAAA AGGATGGCCG AAGTGCTGAT CCGCTTATGC AAACAGGAAA AGTCTGGTGC TGTTTTGAAT TTAAAAATAT CCAGGGATAA CCTGGCCGCT ATGGCTGGTA TGGCCACGGA AACCGTAAGC CGTATCCTGA GCGATTTCAG GGACGAGGGC CTGATAGAAA AGAAAGGCAG CCAGATCATT GTCACCGATG AACTGAAACT CCAACAGATG AAAAACTGA
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Protein sequence | MKRTRILIIE DNEDIRESTA EILELANYEV LQAHNGKVGM ELAAKHLPDL VLCDIMMPEL DGYGVLYLLN KNPKTAATPF IFLTAKAERI DMRKGMEMGA DDYLTKPFDD VELLNAIESR LSKKDKQELF YSQSLDKLST LLGSNSGMAE LQKMIADRKV RNVKKKQVIY YEGDAVQGIY LVLTGKVKTI KLSEDGRELL TGLYNAEEYF GIPALLGHEP YAETAEALED TTVCLLPKEM VEALLNKYPD VAKEFIRILS NNLRSKEEQL LQLAYHSVRK RMAEVLIRLC KQEKSGAVLN LKISRDNLAA MAGMATETVS RILSDFRDEG LIEKKGSQII VTDELKLQQM KN
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