Gene CPF_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0778 
Symbol 
ID4203518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp928482 
End bp929192 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content28% 
IMG OID638081662 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_695229 
Protein GI110799775 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000312841 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA CATGTACATG TGGATCATGT AAAGAACCTT GTGCTAAAAA TATATCTATT 
TTCTCAACAT TATCCACTGA GGAGTTGTTG AAAATAGTTA ATATGACTGA ACATAAAAGT
TTTGAAGAAA ATGATGTTTT ATGTAGAGAA GGAGAAAAAT CAGATAAGCT TTTCTTAATT
AGAGAAGGAA GAGTAAAGAT ATGCAAAATA ACTAAAGAGG GAAAAGAACA GATAGTTTAC
GTATTATCTA AAGGTGATTT CTTTGGAGAA AATAATCTTT TTACTAGTAA TAATATTAGC
AACTTTTCAG CTTATGCAAT AACAGATGCA AAGTTATGTA TTTTAAAAAA GGAGAATTTA
GAAAAAATAC TCATAAAAAA TCCAGAGATA TCATTAAAAA TAATACAAGA GATGGCAGAT
AGAATAAATT CTGCTGAGAA TTTGGCACAA ACTTTAGCTA CTAGGGATGT AGAAGCAAGA
TTAGCCACTG TATTAATAGA ATTTATGGAT AAGTATGGTG AGAAAAATAA AGAAGGAATA
TACATAAGTT TACCTCTAAA TAGAGAACAG ATAGCAAATT ATTGTGGTAT AACAAGAGAA
ACTGTAAGTA GAAGACTTTC AAAATTTGAT AAGTTAGGAA TAATAAAGTT ACAGGGGAAT
AAGGGTCTTA TTGTTAAGGA CAAAGAAGCT TTATTTAGTT TAGCTGAATA G
 
Protein sequence
MEKTCTCGSC KEPCAKNISI FSTLSTEELL KIVNMTEHKS FEENDVLCRE GEKSDKLFLI 
REGRVKICKI TKEGKEQIVY VLSKGDFFGE NNLFTSNNIS NFSAYAITDA KLCILKKENL
EKILIKNPEI SLKIIQEMAD RINSAENLAQ TLATRDVEAR LATVLIEFMD KYGEKNKEGI
YISLPLNREQ IANYCGITRE TVSRRLSKFD KLGIIKLQGN KGLIVKDKEA LFSLAE