More than 300 homologs were found in PanDaTox collection
for query gene Arth_3395 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  100 
 
 
225 aa  437  9.999999999999999e-123  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  99.11 
 
 
225 aa  434  1e-121  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  78.67 
 
 
225 aa  360  8e-99  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  65.62 
 
 
228 aa  299  2e-80  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  65.77 
 
 
226 aa  296  1e-79  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  64.86 
 
 
226 aa  292  2e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  65.32 
 
 
228 aa  292  3e-78  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  66.22 
 
 
225 aa  290  9e-78  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  64.41 
 
 
228 aa  288  5.0000000000000004e-77  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  65.32 
 
 
242 aa  283  1.0000000000000001e-75  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  62.22 
 
 
225 aa  282  4.0000000000000003e-75  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  62.67 
 
 
225 aa  280  1e-74  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  66.67 
 
 
224 aa  276  2e-73  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  62.21 
 
 
220 aa  269  2e-71  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  61.26 
 
 
224 aa  266  1e-70  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  60.62 
 
 
225 aa  266  2.9999999999999995e-70  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  60.18 
 
 
226 aa  265  4e-70  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  59.91 
 
 
226 aa  263  2e-69  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  58.11 
 
 
224 aa  261  6e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  62.22 
 
 
225 aa  261  6.999999999999999e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  57.21 
 
 
225 aa  255  4e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  59.46 
 
 
224 aa  253  1.0000000000000001e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  57.21 
 
 
224 aa  245  4e-64  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  56.76 
 
 
224 aa  244  9.999999999999999e-64  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  56.76 
 
 
224 aa  244  9.999999999999999e-64  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  56.76 
 
 
224 aa  244  9.999999999999999e-64  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  56.31 
 
 
224 aa  243  1.9999999999999999e-63  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  57.66 
 
 
224 aa  243  1.9999999999999999e-63  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  56.89 
 
 
224 aa  243  1.9999999999999999e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  57.21 
 
 
224 aa  242  3.9999999999999997e-63  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  62.11 
 
 
246 aa  239  2.9999999999999997e-62  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  61.23 
 
 
241 aa  236  2e-61  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  57.33 
 
 
224 aa  234  1.0000000000000001e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  54.22 
 
 
224 aa  226  2e-58  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  54.5 
 
 
225 aa  222  3e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  56.76 
 
 
225 aa  221  4.9999999999999996e-57  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  56.31 
 
 
225 aa  221  9e-57  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  48.11 
 
 
236 aa  203  2e-51  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  45.54 
 
 
239 aa  189  4e-47  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  37.16 
 
 
225 aa  158  7e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  36.36 
 
 
243 aa  154  1e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  34.09 
 
 
225 aa  146  2.0000000000000003e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  39.34 
 
 
220 aa  146  3e-34  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  34.25 
 
 
231 aa  143  2e-33  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  32.58 
 
 
226 aa  141  9.999999999999999e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  29.41 
 
 
226 aa  140  9.999999999999999e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  33.64 
 
 
227 aa  139  3e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  29.86 
 
 
225 aa  139  3.9999999999999997e-32  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  38.89 
 
 
225 aa  134  9.999999999999999e-31  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  34.26 
 
 
229 aa  134  9.999999999999999e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  38.74 
 
 
225 aa  133  1.9999999999999998e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  30.99 
 
 
219 aa  133  3e-30  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  34.11 
 
 
230 aa  131  6.999999999999999e-30  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  36.82 
 
 
246 aa  130  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  36.41 
 
 
251 aa  129  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  35.51 
 
 
228 aa  129  4.0000000000000003e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  33.18 
 
 
230 aa  128  5.0000000000000004e-29  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  37.38 
 
 
223 aa  128  7.000000000000001e-29  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  37.56 
 
 
263 aa  125  5e-28  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  34.4 
 
 
236 aa  124  9e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  36.92 
 
 
223 aa  124  1e-27  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  39.58 
 
 
222 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  32.57 
 
 
226 aa  124  2e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  33.5 
 
 
223 aa  123  3e-27  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  33.64 
 
 
230 aa  122  3e-27  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  34.82 
 
 
250 aa  122  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  38.25 
 
 
224 aa  122  4e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  28.24 
 
 
236 aa  122  5e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  27.78 
 
 
236 aa  120  9.999999999999999e-27  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  29.19 
 
 
232 aa  121  9.999999999999999e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  38.07 
 
 
222 aa  120  1.9999999999999998e-26  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  33.7 
 
 
227 aa  120  1.9999999999999998e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  27.31 
 
 
236 aa  119  3.9999999999999996e-26  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.85 
 
 
236 aa  119  3.9999999999999996e-26  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  30.89 
 
 
228 aa  119  3.9999999999999996e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  36.04 
 
 
214 aa  118  7.999999999999999e-26  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  31.19 
 
 
230 aa  116  1.9999999999999998e-25  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  31.63 
 
 
222 aa  116  3e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_010678  Rpic_4483  transcriptional regulator, Crp/Fnr family  38.46 
 
 
243 aa  115  3.9999999999999997e-25  Ralstonia pickettii 12J  Bacteria  normal  normal  0.183908 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  31.08 
 
 
241 aa  116  3.9999999999999997e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4617  transcriptional regulator, Crp/Fnr family  38.46 
 
 
243 aa  115  3.9999999999999997e-25  Ralstonia pickettii 12D  Bacteria  normal  0.652735  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  29.19 
 
 
239 aa  115  3.9999999999999997e-25  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  30.7 
 
 
248 aa  115  5e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  32.55 
 
 
229 aa  115  5e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  36.97 
 
 
218 aa  115  6e-25  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  26.67 
 
 
243 aa  115  6e-25  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  33.18 
 
 
225 aa  115  6e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  30.48 
 
 
234 aa  115  7.999999999999999e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  30.92 
 
 
224 aa  114  1.0000000000000001e-24  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  32.58 
 
 
226 aa  114  1.0000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  34.85 
 
 
254 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  30.28 
 
 
227 aa  114  2.0000000000000002e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  33.49 
 
 
226 aa  113  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  32.87 
 
 
226 aa  113  2.0000000000000002e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_013510  Tcur_1118  transcriptional regulator, Crp/Fnr family  36.06 
 
 
240 aa  113  2.0000000000000002e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  30.14 
 
 
229 aa  113  3e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  31.22 
 
 
224 aa  112  4.0000000000000004e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  29.28 
 
 
222 aa  112  4.0000000000000004e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  29.38 
 
 
230 aa  112  5e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  34.6 
 
 
217 aa  111  8.000000000000001e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
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