Gene Francci3_4286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4286 
Symbol 
ID3907254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5118608 
End bp5119333 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID637881613 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_483361 
Protein GI86742961 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTCTG CCGATAGTCC TGGCATGCTC AGGACCGTGG AGGATCTGCT TGCCCGTGTA 
CCACTGTTCG TAGGGCTGTC CGAGCAGGAC CGAATGGCCC TCTCCGACCA TCTTGATCGG
CAGGATGTCA CCCGTGGGGA CGTGCTGTTC CGTGAAGGAG ATGTCGGGGA CCGGGTCTTC
ATCGTCCTGT CCGGAAAGGT GAAGATAGGA CGTCAGTCGG CCGACGGCCG GGAGAACCTG
CTGTCCGTGA TGGGTCCCGG AGACTTGTTC GGGGAGCTGT CGTTGTTCGA CCCCGGCCCA
CGCACGGCTA CCGCTACGGC AGTCACGGAT GCATCGTTGC TGTTGCTGGA ACATACCGCG
TTGCGTCCCT GGCTGCGATC ACGCCCGGAG GCGGGCGCGA TGCTCCTGCG GGAGCTGGCC
CGCCGGTTGC GGCGTACCAA CGACAACGTT GCCGACATGG TGTTCACGGA TGTGCCGGGG
CGAGTGGCGA AAGCCCTCCT CGACTTGGCG GAACGCTTCG GCGAGCCGGC ACAGCCCGGC
AACGAGGCCG CCGGTGTCCG TGTCGAGCAC GGACTCACGC AGGAGGAACT GGCCCAGCTG
GTGGGCGCGT CCCGGGAGAC GGTGAACAAG GCGCTCGCCG ACTTCGCCAC CCGGGGCTGG
CTGCGCCTGG ACTCCCGCGC GGTCGTGCTG CTCGATCGCG AACGCCTCTC CCGCCGCGCA
CGCTGA
 
Protein sequence
MLSADSPGML RTVEDLLARV PLFVGLSEQD RMALSDHLDR QDVTRGDVLF REGDVGDRVF 
IVLSGKVKIG RQSADGRENL LSVMGPGDLF GELSLFDPGP RTATATAVTD ASLLLLEHTA
LRPWLRSRPE AGAMLLRELA RRLRRTNDNV ADMVFTDVPG RVAKALLDLA ERFGEPAQPG
NEAAGVRVEH GLTQEELAQL VGASRETVNK ALADFATRGW LRLDSRAVVL LDRERLSRRA
R