Gene BBta_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0559 
Symbol 
ID5151047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp560692 
End bp561369 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID640555570 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001236743 
Protein GI148252158 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.338488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.42035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGAGCA AGCAGGCCGA ATTTGCGGTC ATTCTCAAGA TGAACCCGAT GTTCGCGGAC 
CTCGGCGCCG ACGAGCTGCA GCGCTTGTCG AACCTGTGCC ATACCCAGCA TCTGTCATCG
GGCGAGGTGC TGTTCCAGAA GGGCGATCCC GGCAACGCCC TGTTCGGAGT CCGGCGCGGC
CAGATCCGCA TCGAGACCGG CGCGACGGAC GGCAGCCGGC TCACCCTCAA TTTCATGGGC
CCTGGCGACC TGTTCGGAGA GGTCGCCGTG CTCGACGGAC AGGAGCGCAC CGCCGACGCC
ACGGCCGGAG AGACGACCGA GCTGTTCGTG CTCCGCCGCG AGGATTTCCT CAGCTTCCTC
GAGCGCGAAC CCAAGGTCGC GATCAAGATC ATCCAGCTGT TGTGTCAGCG CATCCGCTGG
CAGAGCGAGC GGATGGAGGA GTCGGTGCTG CAGCCGCTGC CGATCCGACT CGCACGCCGG
CTCTGTGCAC TCGCGGAGGA TTTCGGCTCC GAGGTGCATA TCTCGCAGGA GCAGCTCGGC
ATCTTCGTCG GCGCGGCGCG CGAGAGCGTC AACCGCCAGC TTCAGGCGTG GCGCAAGGAC
AAGATCCTGG ACCTGCAACG CGGCCGGATC CTGCTGCATG ACCTGACCAA GCTCAACACC
ATCGCACGGA ACGAGTAG
 
Protein sequence
MMSKQAEFAV ILKMNPMFAD LGADELQRLS NLCHTQHLSS GEVLFQKGDP GNALFGVRRG 
QIRIETGATD GSRLTLNFMG PGDLFGEVAV LDGQERTADA TAGETTELFV LRREDFLSFL
EREPKVAIKI IQLLCQRIRW QSERMEESVL QPLPIRLARR LCALAEDFGS EVHISQEQLG
IFVGAARESV NRQLQAWRKD KILDLQRGRI LLHDLTKLNT IARNE