Gene Lcho_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0755 
Symbol 
ID6161269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp811011 
End bp811679 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID641663505 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001789793 
Protein GI171057444 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.2571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC TCTCGAACCT CGACTTGATC CGGCGCGTGC CGCTGTTTTC AATGCTCACC 
AATGAGCAGG CACAGACGAT CGCGGACGGC GTGGTCAAAC GCCGCTATCG CCGCGGCGAA
ATCATCGTTG AACAAGGCCG CAAGTCGGAT GCCTTGTTCA TCTTGCTCAG CGGCCGCGCA
CGGGTCATCA CGTCGGACTC GCGTGGTCGC GAAGTGATCC TGGCGGTGCT GGAGGCCGGC
GACTACCTCG GCGAGATGAG CCTGATCGAC AACGAGCCGC ATTCGGCCAC CGTGCGCGCC
GAGGTGCAGA CCGATGTGCT GGTGCTGGCA CGCAGCGAGT TCGGGGCCTG TCTGCCCGAG
AACTCCAGCC TGTCGTACGC GATCCTGCGC GGCCTGGTCG GCCGCCTGCG CAACGCCGAC
CGCCAGATCG AGTCGCTCGC GCTGCTCGAC GTCTACGGCC GGGTCGCGCG TGCGCTGCTC
GACATGGCGC AGGACGAAGA AGGCCAGCGC ATGATCCGCA GCAAGGTCTC GCGCCAGGAT
CTGGCCAAGG TGGTCGGCGC CTCGCGCGAG ATGGTCAGCC GCGTCATGAA GGACCTCGAG
GAGCGCGGCC TGATCGAGAC CCAGGAAAAC GGCTGGGTCG TCCTGACCGA CCGCCTGACG
ACGCAGTAA
 
Protein sequence
MAMLSNLDLI RRVPLFSMLT NEQAQTIADG VVKRRYRRGE IIVEQGRKSD ALFILLSGRA 
RVITSDSRGR EVILAVLEAG DYLGEMSLID NEPHSATVRA EVQTDVLVLA RSEFGACLPE
NSSLSYAILR GLVGRLRNAD RQIESLALLD VYGRVARALL DMAQDEEGQR MIRSKVSRQD
LAKVVGASRE MVSRVMKDLE ERGLIETQEN GWVVLTDRLT TQ