Gene Caci_8903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8903 
Symbol 
ID8340296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10314179 
End bp10314853 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID644961993 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003119557 
Protein GI256397993 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACG TACTGCGCCG TACGCCCCTC TTCGCCACGC TCGATGTGGA CGCGGCCGCG 
TCCCTGCGCG CCTCGATGAA CGAGATCGAG CTGGCCCGAG GTGACCTCCT GTTCCACGAG
GGCGACCCCG GGGACTCGCT GTACGTGGTC CTGCGCGGGA AGATCAAGCT CGGCCGCACC
AGCGGCGACG GCCGCGAGAA CCTGGTCGCC GTCCTCGGTC CCGGCGAGAT GTTCGGCGAA
TTGTCCCTGT TCGACCCGGG CCCGCGCTCG GCCGGCGCCA CCGCGCTGGT GGACTCCACC
CTGCTGGGCC TGAGCTCGGA CGAACTGACC CCGTGGCTCG CCACCCGCCC CGACGTGGCC
CGCGCCCTGC TCCGCGCGAT CGCCCGCCGC CTGCGCCGCA CCAACGACTC GATGTCCGAT
CTGGTGTTCT CAGACGTGCC CGGCCGCGTG GCCAAGGCAC TCCTGGACCT GTCGGCCCGC
TTCGGCACAC CGGCCGAGGA CGGCATCCAC GTCGCCCACG ACATGACCCA GGAAGAGCTG
GCCCAGCTGG TCGGCGCCTC CCGCGAGACG GTGAACAAGG CCCTGGCCGA CTTCGCCGGC
CGAGGCTGGC TGCGCCTGGA GGCTCGCGCC GTGGTGCTGA CGAACGTGGA GCGGCTGAGC
CAGCGTTCGC GCTAG
 
Protein sequence
MDDVLRRTPL FATLDVDAAA SLRASMNEIE LARGDLLFHE GDPGDSLYVV LRGKIKLGRT 
SGDGRENLVA VLGPGEMFGE LSLFDPGPRS AGATALVDST LLGLSSDELT PWLATRPDVA
RALLRAIARR LRRTNDSMSD LVFSDVPGRV AKALLDLSAR FGTPAEDGIH VAHDMTQEEL
AQLVGASRET VNKALADFAG RGWLRLEARA VVLTNVERLS QRSR