Gene Franean1_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1101 
Symbol 
ID5669515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1314721 
End bp1315461 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID641240033 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001505463 
Protein GI158312955 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGT CGGCTCCGGG ATCTGCGGCA CACGAGACCG CCGGGCGGCG CTACGTTCAC 
CGCATGCACG ACACTGAGGC GGTCACGCTG CTGCGGGCGA CCACGCTGCT GAAGGAGCTC
GACGAGGAGG ATCTGCTGCG GCTGGCCAGC CGGTCCGTGA CCCGGCGTTT CCGCCGGGGT
CAGGTGGTCT TCACCGAGGG GGAGCCGGCC GACACCCTCC TCGTCATCGC GTCCGGGCGA
CTCAAGATCC TCACCAAGGC CGACGACGGG CGCGACCACG TGCTCAACAT CGCCGGTCCC
CGGGAGACGC TGGGCGAGCT CAACATCGTC GAGGCCGGGA CGAGGTCCGC GAGCGTCGAG
GCGCTCGAGC CGAGCACCGC GCTGGTGCTC GAGCGCAGCG CCGTGTGGGA GCTCGTCCGG
GAGCGCCCGG CTGTCGCCGA GCAGCTCATC CGTGCGCTGG TGGCGCACGT GCGCCGGCTC
ACCGGGGCGA ACGCGGACCT GGTCTTCCTC GATCTCCCGC GCCGGGTCGC GAAGCTGCTG
CTGATGCGGA TGCGCGAGGC CGGCCGGCCG GTCATCGAGC TGGGCCTGAC GCAGACCGAG
ATCGCGTCGC TGCTGGGCGG CTCGCGCCAG TCGGTCAACC AGGCACTGCG TGAGTTCGAG
CGGCGGGCGT GGATCCTGTC CGAAGGTCAG ACGATCACCA TCATGCAGGT CGACCGCCTC
CGCCGGTTCG CGGGCGACTG A
 
Protein sequence
MNVSAPGSAA HETAGRRYVH RMHDTEAVTL LRATTLLKEL DEEDLLRLAS RSVTRRFRRG 
QVVFTEGEPA DTLLVIASGR LKILTKADDG RDHVLNIAGP RETLGELNIV EAGTRSASVE
ALEPSTALVL ERSAVWELVR ERPAVAEQLI RALVAHVRRL TGANADLVFL DLPRRVAKLL
LMRMREAGRP VIELGLTQTE IASLLGGSRQ SVNQALREFE RRAWILSEGQ TITIMQVDRL
RRFAGD