Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4762 |
Symbol | |
ID | 5707479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5390767 |
End bp | 5391444 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641274160 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_001539506 |
Protein GI | 159040253 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.900483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000929699 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACGAGG TACTGGCCCG TAGTGGGATC TTCCAGGGGG TCGACCCAGA GGCTGCCGAG GCGCTCGCCA AGGAGATGGA GACGATCGAG GTCCGCAAGG GCGAGGTCGT CTTCAACGAG GGCGAGCCCG GCGACAGCCT CTACATCCTC CTGTCCGGCA AGATCAAGGT TGGGCGCCGG GCGGCCGACG GGCGACAGAA CCTGATCGCG GTCATGGGGC CCTCGGACAT GGTGGGTGAG CTGTCGCTCT TCGACCCGGG CCCACGGACG GCGACCGCGA CGGCGGTGAC CGACACCCGC CTGGTGCGGC TGCGTAAGCA GGCACTGCGC CCCTGGCTGA ACAACCGGCC GGAGATCGCC GAGCAACTGC TGCGGGTGCT TGCCCGCCGG CTGCGCCGGA CGAACGACTC GCTGGCCGAC CTGATCTTCA CCGACGTGCC CGGTCGGGTC GCGAAGAACC TGCTGCAGTT GGCTGGCCGC TTCGGCACCC GAGACGGCGG TGTGCTGCGG GTGACCCACG ACCTGACCCA GGAGGAGATC GCCCAACTGG TCGGCGCCTC CCGTGAGACG GTCAACAAGG CCCTCGCCGA CTTCGCCTCG CGGGGCTGGC TGCGCCTGGA CGGCAAGAGC ATCATCGTTC TCGATCCGGA GCGCCTGGCT CGTCGCGCCC GCGTTTGA
|
Protein sequence | MDEVLARSGI FQGVDPEAAE ALAKEMETIE VRKGEVVFNE GEPGDSLYIL LSGKIKVGRR AADGRQNLIA VMGPSDMVGE LSLFDPGPRT ATATAVTDTR LVRLRKQALR PWLNNRPEIA EQLLRVLARR LRRTNDSLAD LIFTDVPGRV AKNLLQLAGR FGTRDGGVLR VTHDLTQEEI AQLVGASRET VNKALADFAS RGWLRLDGKS IIVLDPERLA RRARV
|
| |