Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5315 |
Symbol | |
ID | 9249215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 480957 |
End bp | 481643 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003683201 |
Protein GI | 297564228 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.527594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTGGACG AGATCAACGA GGTGCTGCGG AAGGCCCCTC TGTTCGAGGC GCTGGACGAG GAGGACACGG CCGCACTCCG CTCCTCGGTG AACGAGGTGC GTCTCGGCCG CGGCCAGACC CTGTTCAGCG AGGGCGACGA GGGCGACCGC CTGTACGTCA TCCTCAGCGG GAAGGTGAAG CTGACCCGCA CGGCCGTGGA CGGCCGCGAG AACCTGCTCG GGGTGCTCGG CCCCAGCGAG ATGTTCGGCG AGCTGTCGCT GTTCGACCCG CGCCCGCGCA CCGCGAGCGC CGTCGCGGTC ACCGACTCGG TGCTCGCGGG ACTGGGCCAC GACGACCTGC GCCCGTTCCT GTCCAGCCGC CCGCAGGTGT CGCTCCAGCT GCTCAAGGCG CTGGCCGCCC GCCTGCGCCG GACCAACGAC GTGATGGCCG ACCTCGTCTT CACCGACGTG CCCGGCCGCG TCGCCAAGGC TCTGCTGGAG CTGGCCGACA AGTTCGGCAA GGAGGGCGAG GACGGACTGC ACGTCCACCA CGACCTCACC CAGGAGGAGC TCGCCCAGCT GGTCGGCGCC TCCCGTGAGA CGGTCAACAA GGCCCTCGCC GAGTTCGCCC TGCGCGGCTG GCTGCGGATC GAGGCCAAGG CCGTCGTCCT GCTCGACGTC GAGCGGATGC GCCGCCGGGC CCGCTAG
|
Protein sequence | MVDEINEVLR KAPLFEALDE EDTAALRSSV NEVRLGRGQT LFSEGDEGDR LYVILSGKVK LTRTAVDGRE NLLGVLGPSE MFGELSLFDP RPRTASAVAV TDSVLAGLGH DDLRPFLSSR PQVSLQLLKA LAARLRRTND VMADLVFTDV PGRVAKALLE LADKFGKEGE DGLHVHHDLT QEELAQLVGA SRETVNKALA EFALRGWLRI EAKAVVLLDV ERMRRRAR
|
| |