Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1284 |
Symbol | |
ID | 7973208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1398781 |
End bp | 1399455 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644791881 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002943201 |
Protein GI | 239814291 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.304913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGC TGTCCAATCT TGAGTTGCTG CGGCGCGTTC CGCTGTTTGC CTCGCTCACG TCCTCGCAGT CTGCAAGCAT TGCGGATGCG ATCATCAAGA AGCGCTTCAA GCGGGCCGAA GTCGTTGTCG AGCAGGGCAA GAAATCGGAC GCGCTCTACA TCATCCTGAC CGGACGCGCG CGCGTGACGA GCGCCGACAA CCGCGGGCGC GAGGTGATCC TTGCCACCTT GCATCCCGGC GACTACATCG GCGAGATGAG CCTGATCGAC GACGAGCCCC ATTCGGCCAC AGTGCGCACC GAGATCCAGT GCGACGTACT CATGCTGGAC CGGGAAGCCT TCGCACGCTG CCTGCCCGAG AACTCCTCGA TGGCCTACAA CATCATGCGC GGCCTGGTGC AGCGGCTGCG CCATGCCGAC CGCAAGATCG AGTCGCTTGC GCTGATGGAC GTCTATGGGC GCGTGGCGCG CTCGCTGCTC GAGTTCGCGA TCGACGATGG CGCAGGCAAC CTGAAGGTGC GCGACAAGAT CTCGCGCCAG GATCTCGCGA AAATGGTGGG CGCCTCGCGC GAAATGGTGA GCCGCGTGAT GAAGGATCTC GAGGAGCGCG GATTTGTCCA GACCCAGGAC GACGGCTCCA TGATCGTCAA GGACCGGCTC TTGTCCCTGG CTTGA
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Protein sequence | MSMLSNLELL RRVPLFASLT SSQSASIADA IIKKRFKRAE VVVEQGKKSD ALYIILTGRA RVTSADNRGR EVILATLHPG DYIGEMSLID DEPHSATVRT EIQCDVLMLD REAFARCLPE NSSMAYNIMR GLVQRLRHAD RKIESLALMD VYGRVARSLL EFAIDDGAGN LKVRDKISRQ DLAKMVGASR EMVSRVMKDL EERGFVQTQD DGSMIVKDRL LSLA
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