Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0893 |
Symbol | |
ID | 3909073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1026040 |
End bp | 1026720 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882786 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_484515 |
Protein GI | 86748019 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGC AGGCCGAATT CGCGGTCATT CTGAAGCTGA ATCCCTTGTT CGCCGATCTC GGTCCCGAGG AACTGCAGCG GATCGCCGGG CTGTGTCATA CGCAGCAGCT CAATGCCGGC GAAATGTTGT TCCAGAAGGG TGACGACGGC GACGCGTTGT TCGGCGTGCG GCGCGGCCAG ATCCGGATCG AGACCGGCGC CTCCGACGGC AGCCGGCTGA CGCTGAATTT CCTCGGCCCC GGCGATTTGT TCGGCGAGGT CGCGGTGCTG GATGGCCAGA GCCGCACCGC CGACGCCACG GCCGGCGAAC CCACTGAACT GTTCGTGCTG CGGCGTGACG ATTTCCTCGG TCATCTCGAG CGCGAACCGA AGCTCGCGGT GAAACTGATC GCACTGCTGT GCCAGCGCAT CCGCTGGATG AGCGAGCGCA TGGAGGAATC GGTGCTGCAG CCGCTGCCGG TGCGGCTGGC CCGAAGACTG TGCGCGCTCG CGGCCGATTT CGGCGCCGAG GTGCACATCT CGCAGGAGCA GCTCGGCGTG TTCGTCGGCG CGGCGCGCGA GAGCGTCAAC CGCCAGCTGC AGAGCTGGCG CAAGGACGGC ATCCTCGATC TGCACCGCGG CCGCATCCTG CTGAAGAACA TGGGCCGCCT GACGCAAGTC GCGCGCAGCC AGGAGCGCTG A
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Protein sequence | MSTQAEFAVI LKLNPLFADL GPEELQRIAG LCHTQQLNAG EMLFQKGDDG DALFGVRRGQ IRIETGASDG SRLTLNFLGP GDLFGEVAVL DGQSRTADAT AGEPTELFVL RRDDFLGHLE REPKLAVKLI ALLCQRIRWM SERMEESVLQ PLPVRLARRL CALAADFGAE VHISQEQLGV FVGAARESVN RQLQSWRKDG ILDLHRGRIL LKNMGRLTQV ARSQER
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