| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0303 |
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| Symbol | |
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| ID | 8709788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 329259 |
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| End bp | 329969 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482421 |
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| Product | cyclic nucleotide-binding domain protein |
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| Protein accession | YP_003373558 |
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| Protein GI | 283782804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.232206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAC TCAACGTTGA CAGCGATGAA TTTTCACTGC AACATACCGC ATTGTTTAAG
CAAGTTCCAG CTGATCAAGT AAAAGAATTG ATGCAGTATT TACAAGAATC AACATTTAAA
AAAGGTTCTG CAATTTTTAA TGAAGGCGAT ACTGACCATC GAATGTACTT GCTTGAGCGA
GGAAGAGTAA AATTAGTTCG TCATTCAAAC GACAATCGTG TGCAATTGTT AAGTATTCAC
ACTCCTGGCG AAATTCTAGG CGAAATTCCC GTTTTTGACC CTAGCGGCGG TCCTCGTACA
GCTTCAGCAA TATCTATTAC CAACAATACT AGAGTTTTAT GGCTAGAAAA TGACGTGTTA
TTCCATTGGT TAAACAATCA CCCTAGTGTT GCAGTAGATA TGCTTCAGGT GCTTGCAGCG
CGCATGCGAG CAAATAATGA GCGAATTTCC GATTTAGTTT TTATGGATGT TCCTGCTCGT
TTAGCAAAGA CTTTGCTGAA TTTAGCTTCA AGATTTGGTG AGCCTATGAG CGATGGCTTG
CTTGTGCCGC ATGATTTAAC GCAAGAAGAG CTTGCGCAAC TTGTTGGCTC GTCACGCGAA
ACAGTTAACA AAGCGCTTAT GGATTTTGCA AACAGGGGTT GGATTATGCG CCAAGGCAGG
TCAATTATTA TCTACAAGCC TGGCATGCTT ATTCGTCGAG CTGAACGTTA A
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| Protein sequence | MATLNVDSDE FSLQHTALFK QVPADQVKEL MQYLQESTFK KGSAIFNEGD TDHRMYLLER
GRVKLVRHSN DNRVQLLSIH TPGEILGEIP VFDPSGGPRT ASAISITNNT RVLWLENDVL
FHWLNNHPSV AVDMLQVLAA RMRANNERIS DLVFMDVPAR LAKTLLNLAS RFGEPMSDGL
LVPHDLTQEE LAQLVGSSRE TVNKALMDFA NRGWIMRQGR SIIIYKPGML IRRAER
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