Gene Rpal_4520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4520 
Symbol 
ID6412204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4870942 
End bp4871652 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content63% 
IMG OID642714401 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001993490 
Protein GI192292885 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGA TGACAACGAA CCTGGGCCGC AGGTCGACCA AGACATCTGA TGTCGTTCGT 
GCCCAACGGC TGTTTCAGGA TCTTGCGCCC GAAGCGCTCG ACCAGCTCTG CCGCGCCGCC
CGTCTCGTCA GGTTCAGCCG CGGAGAAACC GTCTTCCTCA AGGGAGACGA CGCGAATGCT
CTGTTTGTCG TGGTCGAAGG CGCAATCCGG GTGAGCTCGG GTTCGACCGA TGGACGCACC
GCGATGCTCA ATCTGATCGG CAGTGGCGAG GTCTTCGGCG AGGTGGCCGT GCTGGATGGG
CTGCCACGGA CAACGGATGC CATCGCCCAC AGCGACTCCG TTCTGCTATC GATCGCGCGG
CGCGACCTTT TCGAACTGAT CGACACGCAG CCGCAGCTGA TGATGAAGCT TATCGTTCTG
CTCTGTGGGC GGGTACGCGC GACCAGCCAG CAGGTCGAAT GGTTGATGCT GCAGTCGATG
TCGGCCCGGC TCGCCGGCAC GATCATGCGG CTGGCAGAGC GTGACACCGA TCGGGCTCCG
CTACGTCTCC AACTGACGCA GCAGCAGGTC AGCGAGATGG CCGGCATGTC TCGCGAAAGC
GTCAACAAGC TGCTGGCGCG CTGGGCCTCG CAGGGGTGGA TCAGGCTTGG ACCGCAGACG
TTGGAGATCT TTCAGCCTGA CGCCCTACGT GCGGTTGCGG GCGAAGGCTG A
 
Protein sequence
MTSMTTNLGR RSTKTSDVVR AQRLFQDLAP EALDQLCRAA RLVRFSRGET VFLKGDDANA 
LFVVVEGAIR VSSGSTDGRT AMLNLIGSGE VFGEVAVLDG LPRTTDAIAH SDSVLLSIAR
RDLFELIDTQ PQLMMKLIVL LCGRVRATSQ QVEWLMLQSM SARLAGTIMR LAERDTDRAP
LRLQLTQQQV SEMAGMSRES VNKLLARWAS QGWIRLGPQT LEIFQPDALR AVAGEG