Gene Sked_04890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04890 
Symbol 
ID8632126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp545458 
End bp546138 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID 
ProductcAMP-binding protein 
Protein accessionYP_003313284 
Protein GI269793829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.84759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAACG ACGACGTAGT GCTCTCTGCT CCCCTCTTCG CGACCATGGA AGAGGCCGAG 
ACCCGTGGGC TCCTGGCCTC CATGTCGAAG GTCGAGCTCG CCCGCGGCGA CGTGCTGTTC
ACCGAGGGTC AGCCCGGTGA CCGGCTCTAC GTCATCAGCG AGGGCAAGAT CAAGCTCGGC
CGCAGCTCGA GCGACGGCCG GGAGAACCTC ATCGCCGTCC TCGGACCGGG CGAGATGTTC
GGCGAGCTGT CCCTGTTCGA CCCAGGCCCC CGCTCGCTCG GCGCGAGCGC CGTCTCCGAC
TCGGTGGTCT ACGAGCTCGG CCACGACGCG CTGCTCCGCG TGCTCGAGGA GAACCCGGGC
GTGGCCAAGC ACCTGCTGAC CGCCCTGGCG CGCCGCCTGC GCCGCACCAA CGAGGCGCTC
GCCGACCTCG TGTTCTCCGA CGTGCCCGGC CGTGTCGCCA AGGCGCTCCT CGACCTCTCC
ACCCGCTTCG GCGAGCAGGT CGACGAGGGC ATCCGCGTCG CTCACGACCT CACGCAGGAG
GAGCTCGCCC AGCTGGTCGG CGCCTCCCGC GAGACCGTCA ACAAGGCGCT CGCCGACTTC
GCCGGCCGTG GCTGGGTCCG CCGTGAGGGT CGCGCCGTGG TGCTGCTCGA CCTCGACCGG
CTCGAGCGCC GCGCGCGCTG A
 
Protein sequence
MDNDDVVLSA PLFATMEEAE TRGLLASMSK VELARGDVLF TEGQPGDRLY VISEGKIKLG 
RSSSDGRENL IAVLGPGEMF GELSLFDPGP RSLGASAVSD SVVYELGHDA LLRVLEENPG
VAKHLLTALA RRLRRTNEAL ADLVFSDVPG RVAKALLDLS TRFGEQVDEG IRVAHDLTQE
ELAQLVGASR ETVNKALADF AGRGWVRREG RAVVLLDLDR LERRAR